Bioconductor Mofa2

Showing : mofa2 • reset

1

vote

1

reply

137

views

MOFA2

updated 21 days ago by James W. MacDonald 63k • written 21 days ago by Dan • 0

0

votes

1

reply

334

views

RStudio MOFA2 bug knitr

updated 7 months ago by James W. MacDonald 63k • written 7 months ago by Kevin Coombes ▴ 430

2 results • Page 1 of 1

Recent ...

Replies

Comment: Error: biomaRt has encountered an unexpected server error. by Mike Smith ★ 6.0k

Unfortunately, the BioMart LDS functionality have been flaky for a while now e.g. https://support.bioconductor.org/p/9143401/ , https:/…

Comment: Use with_go along with other filters in getBM function by Mike Smith ★ 6.0k

Hi @rubbit0, I'm not sure I understand what you're trying to do. Do you have a long list of Ensembl Gene IDs and you're trying to select …

Comment: Adjusting for baseline when having longitudinal data, mixed model and no treat by Anna ▴ 20

Dear Gordon, these are my metadata. As you see some subject are missing for timepoint 1 Subject Timepoint 1 ID1 Baselin…

Comment: Question on constructing design matrix and defining contrasts for analysis by mohammedtoufiq91 ▴ 10

Sure, noted.

Comment: Question on constructing design matrix and defining contrasts for analysis by mohammedtoufiq91 ▴ 10

@gordonsmyth Yes, I realized while re-running through the WGCNA workflow and forget to account for the paired experiment. For general gene …

Votes

Dispersion plot -Interpretation -DESeq2

Answer: Dispersion Estimates and MA plots

WGCNA with paired samples

Awards • All