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mzr/ msnbase
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Scans vs Spectra
mass spectrometry
mzr/ msnbase
4.0 years ago
Ed Siefker
▴ 230
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mZR: access "parentFile" tag
mZR
mzr/ msnbase
updated 4.0 years ago by
Laurent Gatto
1.5k • written 4.0 years ago by
cclark42
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How to define data directories and syntax before using readMSData in MSnBase
mzR/ msnBase
4.4 years ago
malcolmjctaylor
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Comment: broken chain import in liftOver
by
Marcel Ramos
570
You could also try using one of the chain files in `AnnotationHub`, which gets auto-cached: ```r library(AnnotationHub) query(ah <- Annot…
Answer: paired analysis : return data matrix with indvidual/subject effects eliminated.
by
James W. MacDonald
59k
See `removeBatchEffect` in the `limma` package.
Comment: GDCdownload Directory Problem :(
by
Marcel Ramos
570
FWIW, `TCGAutils` is not a related package.
Comment: help please!
by
1051444231
• 0
I have updated Rtools
Comment: help please!
by
1051444231
• 0
> BiocManager::install("AnnotationDbi",force = TRUE) 'getOption("repos")' replaces Bioconductor standard repositories, see '?repositories' …
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Answer: broken chain import in liftOver
Answer: toGRanges help!
Answer: toGRanges help!
Comment: CPM after RUVseq
A: Using the plotting functions of clusterProfiler / enrichplot with enrichment res
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