Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
nested
•
reset
0
votes
1
reply
478
views
deseq2 nested multifactorial analysis
DESeq2
multifactorial
nested
updated 16 months ago by
Basti
▴ 780 • written 16 months ago by
jd
• 0
0
votes
3
replies
1.2k
views
Is it possible to specify random nested factor in DEseq2?
nested
DESeq2
updated 2.5 years ago by
Michael Love
42k • written 2.6 years ago by
yampolsk
• 0
0
votes
3
replies
1.1k
views
Nested design- phyloseq_to_deseq
deseq2
Phyloseq
Nested
updated 4.3 years ago by
Michael Love
42k • written 4.3 years ago by
mpuli011
• 0
1
vote
2
replies
862
views
Correct DESeq2 interaction design and results with paired and nested data
deseq2
Paired
Nested
updated 4.5 years ago by
Michael Love
42k • written 4.5 years ago by
julia.chariker
▴ 10
0
votes
3
replies
1.1k
views
DESeq2 - nested samples (individuals) - time course - conditions
deseq2
nested
de
updated 4.7 years ago by
Michael Love
42k • written 4.7 years ago by
gaio.transposon
• 0
4
votes
7
replies
1.3k
views
EdgeR between/within comparisons (3.5) with nested non-balanced data set
edgeR
nested
glm
glmQLFit
updated 5.3 years ago by
Aaron Lun
★ 28k • written 5.3 years ago by
jcalis
▴ 10
1
vote
1
reply
2.6k
views
EdgeR:Calculating differential expression within/between groups in nested designs
edger
nested
design matrix
differential expression
updated 9.4 years ago by
Aaron Lun
★ 28k • written 9.4 years ago by
Mauve
• 0
4
votes
5
replies
1.9k
views
edgeR: estimating dispersion for nested designs
edger
nested
estimatedispersions
9.5 years ago
Mauve
• 0
8 results • Page
1 of 1
Recent ...
Replies
Comment: 'path' must be string
by
James W. MacDonald
66k
Yes. We already knew that from the error message, and I told you that in my previous email. The point wasn't to figure out *where* the err…
Comment: 'path' must be string
by
cpierce2
• 0
I ran the debugger and this is the line that causes the error: ``` if (any(startsWith(pkcData[["RTS_ID"]][1L], "RTS")) & any(startsWith(pr…
Comment: Generating surrogate variables across multiple variables of interest
by
Robert
• 0
Yes, we have several biomarkers, and a proteomic set, so we are characterizing each biomarker by it's proteomic association(s). The use for…
Comment: Error running tximeta
by
Guido Hooiveld
★ 4.0k
FYI (since I just finalized a run with `salmon`). For each sample (`.`) an output folder is created that contains 3 files (`cmd_info.json`…
Comment: Error running tximeta
by
Michael Love
42k
Tximeta uses the full directory. There are files that give the key information about the transcriptome. It's not a good idea to selectively…
Votes
Question: Deconvolution Methods on RNA-Seq Data (Mixed cell types)
Answer: Understanding how to contrast two treatments in DESeq2
Answer: Understanding how to contrast two treatments in DESeq2
Cannot extract TxFeatures for a defined GRanges object
Limma time series spline help
Awards
• All
Popular Question
to
Lluís Revilla Sancho
▴ 730
Popular Question
to
maltethodberg
▴ 180
Scholar
to
Michael Love
42k
Popular Question
to
Leonardo Collado Torres
★ 1.1k
Scholar
to
Gordon Smyth
51k
Locations
• All
Hong Kong,
17 minutes ago
France,
26 minutes ago
WEHI, Melbourne, Australia,
59 minutes ago
Ann Arbor,
3 hours ago
San Diego,
3 hours ago
Traffic: 576 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6