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PING PING

updated 12.5 years ago by Xuekui Zhang ▴ 20 • written 12.6 years ago by Lars Hennig ▴ 10

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Cancer PING Cancer PING

updated 13.2 years ago by Dan Tenenbaum ★ 8.2k • written 13.2 years ago by Philip Lijnzaad ▴ 160

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Cancer PING Cancer PING

updated 13.2 years ago by David Henderson ▴ 20 • written 13.2 years ago by Philip Lijnzaad ▴ 160

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Cancer rtracklayer GenomicRanges PING SANTA Cancer rtracklayer GenomicRanges PING SANTA

updated 14.5 years ago by Ping Ma ▴ 10 • written 14.5 years ago by Hervé Pagès 16k

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miRNA Biophysics Homo sapiens biomaRt PING miRNA Biophysics Homo sapiens biomaRt PING

updated 15.4 years ago by michael watson IAH-C ★ 3.4k • written 15.4 years ago by mauede@alice.it ▴ 870

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limma PING limma PING

21.5 years ago Gordon Smyth 52k

6 results • Page 1 of 1

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Answer: scuttle::perFeatureQCMetrics runs very slow for big scRNA-seq data by Aaron Lun ★ 28k

You don't mention how your matrix data is being represented, but if it's a file-backed matrix (e.g., `HDF5Matrix` or one of its variants, b…

Comment: contrast matrix design for a continuous variable by dtzhu337 • 0

Thank you, Gordon. X is time splines for time point, and yes, it's needed. However, I was also thinking to incorporate time point with se…

Answer: contrast matrix design for a continuous variable by Gordon Smyth 52k

Yes, the design and contrasts are correct. Your analysis is also adjusted for covariates defined by X, which I assume is what you want to …

Comment: fail to use addPerROIQC in Rmd by liu.n • 0

That's odd. So it can run successfully within markdown but would be failed when knitting?

Comment: fail to use addPerROIQC in Rmd by joseph.joonsang • 0

> dim(spe) [1] 19962 425

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Answer: contrast matrix design for a continuous variable

A: What's the difference between p.adjust and qvalue?

Answer: DESeq2- merging technical vs biological replicates

Comment: What type of counts data to import for performing Isoform analysis in edgeR

Answer: What type of counts data to import for performing Isoform analysis in edgeR

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Popular Question to Ou, Jianhong ★ 1.3k