Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
plotGenomicRegions
•
reset
0
votes
1
reply
830
views
ASpli package function plotGenomicRegions fails in windows
ASpli
plotGenomicRegions
updated 3.9 years ago by
emancini
▴ 50 • written 4.9 years ago by
mgdrnl
• 0
0
votes
1
reply
651
views
function plotgenomicregions does not appear in the aspli package installed in windows
software error
aspli
plotgenomicregions
windows
4.2 years ago
joanmarquez21
• 0
2 results • Page
1 of 1
Recent ...
Replies
Comment: Warning message when running limma with covariates
by
Chris
▴ 10
Hi Gordon, My contract matrix has rows name: Intercept, vector_age, sex_vector2, group_vectorMCI. Column name design matrix: (Intercept), …
Answer: Warning message when running limma with covariates
by
Gordon Smyth
51k
The message seems self-explanatory, does it not? It is telling you that `row.names(contrast_matrix)` is not the same as `colnames(design)`.…
Answer: Right way to pseudobulk donors across replicates in edgeR
by
Reza Ghamsari
• 0
Hi Jack, Sorry if this is a naive question, but I'm a bit lost here. If I understand correctly, you have six batches (run) of 10x single…
Answer: limma comparison for small sample size and how to get covariance matrix
by
Gordon Smyth
51k
limma has already downweighted the outlier samples, which is the purpose of `sample.weights=TRUE` in the `voomLmFit()` call. So limma has a…
Comment: Limma with covariates
by
Chris
▴ 10
Thank you James for the detailed follow up! I great appreciate it. The first model.matrix is similar to mine with 4 columns. Try your sugge…
Votes
Answer: Warning message when running limma with covariates
Answer: Warning message when running limma with covariates
Comment: Limma with covariates
Answer: Limma with covariates
A: How to use GenomicRanges to find overlaps by percentage covered of interval
Awards
• All
Popular Question
to
Gordon Smyth
51k
Popular Question
to
BioNovice247
• 0
Scholar
to
James W. MacDonald
66k
Teacher
to
Michael Love
42k
Teacher
to
Yang Liao
▴ 440
Locations
• All
The city by the bay,
3 minutes ago
India,
51 minutes ago
UPF, Barcelona, Spain,
1 hour ago
United States,
1 hour ago
San Diego,
1 hour ago
Traffic: 613 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6