Bioconductor Profileplyr

Showing : profileplyr • reset

2

votes

3

replies

968

views

ChIPSeq profileplyr DiffBind

updated 2.1 years ago by doug.barrows ▴ 20 • written 2.2 years ago by zhuyi05 • 0

2

votes

5

replies

2.4k

views

profileplyr ATACSeq DiffBind ComplexHeatmap ChIPSeq

updated 9 months ago by Junsik • 0 • written 2.4 years ago by Rory Stark ★ 5.0k

1

vote

2

replies

629

views

profileplyr

2.6 years ago alexandre.blais ▴ 50

3 results • Page 1 of 1

Recent ...

Replies

Answer: Gviz: UcscTrack and "GC Percent" information by Daniel E. Weeks ▴ 20

**Answer** In https://github.com/ivanek/Gviz/issues/71 an update that fixes this issue was documented - there it is stated that "…

Comment: Biostrings error at retrieving protein sequences by James W. MacDonald 63k

It depends on what kind of whitespace it is. If the whitespace is just a space, then it will work. But if it's a tab, it won't. ``` > gsub…

Comment: Biostrings error at retrieving protein sequences by nromerov • 0

If i write it like ```r gsub(" .*", "", names(protein_sequences)) ``` it will delet all the extra information if it is on the AAString…

Comment: bug in block.plsda from mixOmics? by Lluís Revilla Sancho ▴ 720

Oh, sorry for the noise, I see that just after Bioconductor 3.16 the bug is fixed in both 3.17 and in devel. Thanks for checking.

Answer: Mixed up sample info with plotPCA by Michael Love 40k

I can already tell there is code you aren't showing. For example, your `pcaData` has a variable 'group' that isn't in the previous sample i…

Votes

Answer: Mouse to Human Genes using bioconductor

Mouse to Human Genes using bioconductor

Answer: How do I merge a list of GRanges?

Awards • All

Popular Question to Daniel E. Weeks ▴ 20

Popular Question to Guido Hooiveld ★ 3.7k