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HTqPCR Normalization
qPCR qPCR
updated 13.2 years ago by ▴ 300 • written 13.2 years ago by ▴ 10
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Normalization of array leads to decrease in number of differentially expressed genes
qPCR Normalization qPCR Normalization
updated 13.2 years ago by ▴ 430 • written 13.2 years ago by ▴ 290
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4
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1.9k
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HTqPCR problems
qPCR GO Preprocessing GLAD HTqPCR qPCR GO Preprocessing GLAD HTqPCR
updated 13.3 years ago by ▴ 340 • written 13.3 years ago by ★ 2.0k
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miRNA exiqon panels and HTqPCR
miRNA qPCR PROcess HTqPCR miRNA qPCR PROcess HTqPCR
13.3 years ago Heidi Dvinge ★ 2.0k
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6
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2.7k
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HTqPCR
qPCR GO GLAD HTqPCR qPCR GO GLAD HTqPCR
updated 13.3 years ago by ★ 2.0k • written 13.3 years ago by ▴ 40
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884
views
other questions for HTqPCR
qPCR qPCR
13.3 years ago Heidi Dvinge ★ 2.0k
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5
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2.1k
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HTqPCR problem
qPCR qPCR
updated 13.3 years ago by ▴ 200 • written 13.3 years ago by ▴ 860
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1
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1.2k
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HTqPCR
qPCR limma HTqPCR qPCR limma HTqPCR
13.4 years ago Heidi Dvinge ★ 2.0k
0
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1.2k
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PLS help: is it sound to normalized highthrouput qPCR arrays using vsn?
qPCR Normalization vsn qPCR Normalization vsn
13.5 years ago Ali Mohammadian ▴ 290
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911
views
Any code for simulation of qPCR studies?
qPCR qPCR
13.6 years ago Ali Mohammadian ▴ 290
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0
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1.1k
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File formats for high throughput qPCR data
qPCR HTqPCR qPCR HTqPCR
13.6 years ago Heidi Dvinge ★ 2.0k
0
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1
reply
1.0k
views
clusterCt {HTqPCR}
qPCR qPCR
updated 13.6 years ago by ★ 2.0k • written 13.6 years ago by ▴ 290
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0
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1.6k
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Estimating fold change from limma 'log2FC' using lumi vst instead of log2 transformation?
Microarray qPCR Normalization limma lumi Microarray qPCR Normalization limma lumi
13.7 years ago Ross ▴ 30
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1.0k
views
HTqPCR package
qPCR probe qPCR probe
13.8 years ago Heidi Dvinge ★ 2.0k
0
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0
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743
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MA plot for highthrouput qPCR assay
qPCR qPCR
13.8 years ago Ali Mohammadian ▴ 290
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0
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1.5k
views
Bioconductor 2.9 is released
Transcription Sequencing miRNA qPCR Proteomics Annotation Normalization Visualization cdf
13.9 years ago Dan Tenenbaum ★ 8.2k
0
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3
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1.3k
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Manual creation of Affybatch object to study highthrouput qPCR experiments.
miRNA qPCR affy miRNA qPCR affy
updated 14.0 years ago by ▴ 300 • written 14.0 years ago by ★ 13k
0
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1
reply
1.4k
views
HTqPCR
qPCR PROcess HTqPCR qPCR PROcess HTqPCR
14.1 years ago Heidi Dvinge ★ 2.0k
0
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1
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1.3k
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PCR efficiency correction with HTqPCR
qPCR GO Prostate HTqPCR qPCR GO Prostate HTqPCR
updated 14.1 years ago by ★ 2.0k • written 14.1 years ago by ▴ 20
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votes
2
replies
1.9k
views
Compatibility of Biorad cfx files to HTqPCR?
qPCR HTqPCR qPCR HTqPCR
updated 14.5 years ago by ★ 2.0k • written 14.5 years ago by ▴ 10
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1
reply
1.0k
views
Testing biased microarray data
qPCR limma qPCR limma
updated 14.5 years ago by ★ 3.8k • written 14.5 years ago by ▴ 370
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votes
3
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1.8k
views
RNASeq, differential expression between group, and large variance within groups
RNASeq qPCR edgeR DESeq RNASeq qPCR edgeR DESeq
updated 14.6 years ago by ★ 6.0k • written 14.6 years ago by 53k
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6
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1.9k
views
HT qPCR - error in scale rank invariant
miRNA qPCR miRNA qPCR
updated 14.7 years ago by ★ 2.0k • written 14.7 years ago by ▴ 810
0
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4
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1.6k
views
HTqPCR questions
qPCR HTqPCR qPCR HTqPCR
updated 14.7 years ago by ▴ 330 • written 14.7 years ago by ★ 2.0k
0
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0
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2.1k
views
HTqPCR R Bioconductor question (problem reading SDS files for qPCR) (Alexander Williams)
qPCR HTqPCR qPCR HTqPCR
14.8 years ago Alexander Williams ▴ 20
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0
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1.7k
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HTqPCR R Bioconductor question (problem reading SDS files for qPCR)
qPCR HTqPCR qPCR HTqPCR
14.8 years ago Alexander Williams ▴ 20
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0
replies
1.4k
views
qPCR 2011 Symposium Talk and Poster CALL
qPCR Genetics microRNA qPCR Genetics microRNA
14.8 years ago qPCR Platform - the reference in real-t… ▴ 170
0
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1.5k
views
qPCR Event Calendar - winter 2010
SNP qPCR Genetics Normalization Clustering Regression Cancer Breast Xenopus laevis probe
14.9 years ago qPCR Platform - the reference in real-t… ▴ 170
0
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2
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1.8k
views
HTqPCR : readCtData problem?
miRNA qPCR HTqPCR miRNA qPCR HTqPCR
15.0 years ago Heidi Dvinge ★ 2.0k
0
votes
0
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1.3k
views
HTqPCR problem
qPCR GO HTqPCR qPCR GO HTqPCR
15.0 years ago Heidi Dvinge ★ 2.0k
0
votes
0
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1.4k
views
qPCR Event Calendar - autumn/winter 2010
qPCR Normalization Clustering probe microRNA qPCR Normalization Clustering probe microRNA
15.1 years ago qPCR Platform - the reference in real-t… ▴ 170
0
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2
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1.5k
views
questions concerning quantile normalization in HTqPCR
miRNA qPCR miRNA qPCR
updated 15.1 years ago by ★ 2.0k • written 15.1 years ago by ▴ 810
0
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1
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1.2k
views
normalization usinf the delta Ct method
qPCR Normalization qPCR Normalization
updated 15.1 years ago by ★ 13k • written 15.1 years ago by ▴ 810
0
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1
reply
1.6k
views
gcrma vs rma
Microarray qPCR probe ROC limma gcrma Microarray qPCR probe ROC limma gcrma
updated 15.1 years ago by ▴ 260 • written 15.1 years ago by ▴ 330
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2
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1.3k
views
Advise on setting up a non-specific filter for differential expression
qPCR qPCR
15.2 years ago Lucia Peixoto ▴ 330
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2
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1.4k
views
Advise on setting up a non-specific filter for differential expression
qPCR qPCR
15.2 years ago Tobias Straub ▴ 430
0
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2
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2.1k
views
Bacterial genomics
Sequencing Microarray qPCR genomes Sequencing Microarray qPCR genomes
updated 15.2 years ago by 16k • written 15.2 years ago by ▴ 30
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4
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3.0k
views
HTqPCR to analyze Fluidigm 96.96 Dynamic Array data
qPCR HTqPCR qPCR HTqPCR
updated 15.3 years ago by ★ 2.0k • written 15.3 years ago by ▴ 30
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1.4k
views
Experimental design for RNA-Seq
Sequencing qPCR Cancer Sequencing qPCR Cancer
15.4 years ago Jakob Hedegaard ▴ 170
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4
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1.8k
views
Reading in data with HTqPCR
qPCR Cancer cycle HTqPCR qPCR Cancer cycle HTqPCR
15.4 years ago Heidi Dvinge ★ 2.0k
0
votes
12
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2.5k
views
htqPCR question
miRNA qPCR Normalization limma miRNA qPCR Normalization limma
updated 15.5 years ago by ★ 2.0k • written 15.5 years ago by ▴ 810
0
votes
9
replies
2.1k
views
htqPCR question
miRNA qPCR limma miRNA qPCR limma
updated 15.5 years ago by ▴ 810 • written 15.5 years ago by ★ 2.0k
0
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0
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1.8k
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qPCR event preview - April 2010
miRNA qPCR Normalization probe microRNA cycle miRNA qPCR Normalization probe microRNA
15.5 years ago qPCR Platform - the reference in real-t… ▴ 170
0
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4
replies
1.4k
views
HTqPCR only works for 384 qPCR plates
qPCR qPCR
updated 15.5 years ago by ★ 2.0k • written 15.5 years ago by ▴ 810
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0
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1.2k
views
qPCR plates containing multiple samples in HTqPCR
qPCR HTqPCR qPCR HTqPCR
15.7 years ago Heidi Dvinge ★ 2.0k
0
votes
3
replies
1.3k
views
HTqPCR and limma and factorial design with no replicates
Microarray qPCR Classification limma HTqPCR ASSIGN Microarray qPCR Classification limma
updated 15.7 years ago by ★ 6.0k • written 15.7 years ago by ▴ 810
0
votes
1
reply
1.4k
views
HTqPCR and limma and factorial design with no replicates
Microarray qPCR Classification limma HTqPCR ASSIGN Microarray qPCR Classification limma
updated 15.7 years ago by ★ 6.0k • written 15.7 years ago by ▴ 810
0
votes
4
replies
1.3k
views
HTqPCR and factorial design
qPCR HTqPCR qPCR HTqPCR
updated 15.7 years ago by ★ 2.0k • written 15.7 years ago by ▴ 810
0
votes
0
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1.5k
views
Bioinformatics Post doc position at UCSF
miRNA Microarray qPCR miRNA Microarray qPCR
15.7 years ago audrey ▴ 280
0
votes
0
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1.5k
views
Bioconductor 2.5 is released
Sequencing miRNA Microarray qPCR Annotation Network Bayesian Regression CGH stam Rintact
16.0 years ago Patrick Aboyoun ★ 1.6k
119 results • Page 2 of 3
Recent ...
Replies
Comment: Help with defining groups by Phinney, Brett ▴ 10
I got it working , thank you!!!
Comment: Check removeBatchEffect effectiveness by massimo • 0
I would kindly ask for additional support. When not including the design_timepoint argument in removeBatchEffect and thus keeping the inter…
Comment: Error Loading Experiment from SimBenchData Package by ksankaran • 0
Aha, that was it! The object was class Seurat, but I didn't have it installed. After installing, everything works as expected.
Comment: Streamlining the computing time for MiloDE p-value correction in large dataset? by ATpoint ★ 5.0k
Is a method that is so computationally expensive really beneficial and necessary? You seem to have biological replication, don't you, so ps…
Answer: NA values for DESeq2 p-values and adjusted p-values using large sample sizes by ATpoint ★ 5.0k
Outliers without replacement, independent filtering or all-zero counts for that gene. That's the three options that trigger NAs https://bio…
Votes
Comment: Check removeBatchEffect effectiveness
Gene expression associated with continuous (quantitative) traits (Limma/edgeR/correlation)
Answer: Error Loading Experiment from SimBenchData Package
Comment: incomplete imputation of missing values with LEA impute() function
Answer: Expected memory usage for analyzing large single-cell seq datasets (> 450,000 ce
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