updated 2.9 years ago by
Gordon Smyth
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written 3.0 years ago by
bastien_chassagnol
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Comment: NCBI protein to NCBI cDNA (Ensembl conversions would be great as well) in R
by
James W. MacDonald
64k
It does look like CBP2 is an HGNC symbol, not a protein ID though.
```
> z <- select(ws, "CPB2", c("gene_names","xref_geneid","xref_ensemb…
Comment: How can I avoid artifacts in gene set/pathway scoring by UCell and similar algor
by
arina
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0
Hi Omer,
Unfortunately I don't have an answer to your issue, but I am facing a very similar problem after integrating datasets that were …
Answer: NCBI protein to NCBI cDNA (Ensembl conversions would be great as well) in R
by
James W. MacDonald
64k
I don't know what you mean by 'cDNA value'. That could mean any number of things, I suppose, particularly if you don't know what cDNA is (p…
Comment: How can we use the organism database created by makeorgPackageFromNCBI to KEGG a
by
Guido Hooiveld
★
3.8k
What did you try yourselves? Again, please show your code....!!
For KEGG-based analysis you can make use of the convenience functions `enr…
Comment: Deleted:No significant MVPs with a BH adjusted P-value below 0.05
by
Basti
▴
740
The image is blurred, but you need to follow ATpoint advice and restart the entire analysis using a clean environment.
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