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rna
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3
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Limma: log2 of TMM values for RNA-Seq Analysis and PlotMDS()?
Log2
edgeR
RNA
limma
Normalization
12 weeks ago • updated 11 weeks ago
Sara
• 0
0
votes
0
replies
103
views
Correct GFF3 translation for FeatureCounts
RNASeq
FeatureCounts
Rna
3 months ago
rridley3
• 0
0
votes
1
reply
177
views
Confused about design for RNA seq experiment
RNAseq
ExperimentData
RNAseq123
RNA
ExperimentalDesign
updated 4 months ago by
ATpoint
★ 2.1k • written 4 months ago by
Mohamed
• 0
0
votes
0
replies
256
views
Job:
Scientist/Senior Scientist – Bioinformatics / Computational Biology
MassSpectrometryData
RNA
DifferentialExpression
5 months ago
António Miguel de Jesus Domingues
▴ 490
0
votes
2
replies
294
views
Rsubread align --R session aborts
RNA
Alignment
Rsubread
6 months ago • updated 5 months ago
sreekalasn
• 0
2
votes
1
reply
300
views
Error in RNAseq123 analysis, unexpected symbol.
RNAseq123
Rna
updated 7 months ago by
Gordon Smyth
47k • written 7 months ago by
Mikołaj Mierzejewski
• 0
1
vote
2
replies
492
views
Is it necessary to standardize Combat in R?
RNA
Combat
sva
R
8 months ago
takemoto
• 0
1
vote
1
reply
323
views
Description of the headers obtained from the Eligos2 output
methylation
RNA
native
epitranscriptomics
updated 11 months ago by
tcalvo
▴ 80 • written 11 months ago by
megha.hs28
▴ 10
8 results • Page
1 of 1
Recent ...
Replies
Comment: DESeq2 and heatmap for multiple comparisons
by
artem.vorobyev
• 0
this I already did. My question is how to visualize differentially expressed genes on the heatmap for all 3 groups (healty->lesion->treat…
Comment: athPkgBuilder data source :missing probesets
by
nicklesteele532
• 0
> >>> > >>> How to handle the one probeset to multiple locus mappings? I can > >think 3 > >>> possible solutions: > >>> 1. pick the "best" …
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
> sum(width(gr_toexclude)) [1] 2713499861 I excluded everything which was not locus. If small rna locus is from 2000 to 4000 and next locu…
Comment: Why in Bioconductor community people rarely upvote questions?
by
Hervé Pagès
16k
BTW I fail to see how the lack of upvotes to a question would be discouraging as long as you get a good answer. OTOH I can see how failing …
Answer: DESeq2 and heatmap for multiple comparisons
by
swbarnes2
★ 1.2k
If you want to know what genes are different between lesion and treated, compare them to each other.
Votes
Comment: recount 3 protect read length metadata
Answer: Doubts about manipulation and annotation of microarray files deposited at GEO
C: Batch correction in DESeq2
Comment: Strand information in a GAlignmentsList object derived from strand-specific pair
Comment: Strand information in a GAlignmentsList object derived from strand-specific pair
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