Bioconductor Ropls

Showing : ropls • reset

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4.8k

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ropls

updated 7.8 years ago by etienne.thevenot ▴ 40 • written 7.8 years ago by dominik.guggisberg • 0

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3.1k

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plsda ropls

updated 6.6 years ago by etienne.thevenot ▴ 40 • written 6.6 years ago by michael.eisenring ▴ 10

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2.6k

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s-plot ropls opls-da rna-seq

updated 2.7 years ago by Nathalie ▴ 10 • written 3.8 years ago by andreia ▴ 10

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1.7k

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ROPLS LPS-DA

6.1 years ago abigailrandall85 • 0

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1.6k

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metabolomicsWorkbenchR PLS OPLS Metabolomics ropls

updated 2.8 years ago by etienne.thevenot ▴ 40 • written 2.8 years ago by Fernando • 0

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1.4k

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R ropls

updated 6.0 years ago by etienne.thevenot ▴ 40 • written 6.0 years ago by yuan.guo001 • 0

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1.0k

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ropls

22 months ago g0079 • 0

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1.0k

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ropls

updated 5.9 years ago by etienne.thevenot ▴ 40 • written 5.9 years ago by scottericr • 0

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938

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crlmm ropls Metabolomics

updated 10 months ago by James W. MacDonald 65k • written 10 months ago by Charlotte • 0

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856

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ropls

updated 3.9 years ago by Kevin Blighe ★ 3.9k • written 3.9 years ago by tor.demmers • 0

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717

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Metabolomics ropls

updated 17 months ago by etienne.thevenot ▴ 40 • written 17 months ago by ansari.maya022 • 0

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632

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ropls

3.7 years ago guido.guberman • 0

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578

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Metabolomics ropls

updated 16 months ago by etienne.thevenot ▴ 40 • written 16 months ago by ansari.maya022 • 0

13 results • Page 1 of 1

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Comment: Once again a "Model matrix not full rank" by James W. MacDonald 65k

You already ran a temporal assay. Now you can compare each time point to the baseline. The interaction term is only applicable if you have…

Comment: Timecourse RNASeq analysis by Aurora • 0

I managed to run ImpulseDE2 as I am interested in getting significant gene changes over time. Now I would like to run deseq as well and com…

Comment: Once again a "Model matrix not full rank" by arfranco ▴ 130

But.. How to run a temporal assay?

Comment: Deseq2 and Normalization of RNA sequencing data by kcarey • 0

Noise in terms of expression...to make sure that the information reported is not due to artifacts and actually expression. When I had FPKM …

Answer: NEED FOR NESSASORY HELP by Gordon Smyth 50k

Is this quesion related to your earlier question? https://support.bioconductor.org/p/9157127/ If you've already done an edgeR analysis, yo…

Votes

Bioconductor 3.19 is Released!

A: Error in DESeqDataSet : some values in assay are not integers

Bioconductor 3.19 is Released!

Answer: DEseq2 coefficient

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