Bioconductor Rsubread

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2.0k

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Alignment Rsubread Alignment Rsubread

13.4 years ago Davis, Wade ▴ 350

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4.0k

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Normalization GO graph Rsubread Normalization GO graph Rsubread

updated 13.5 years ago by Gordon Smyth 53k • written 13.5 years ago by Tim Triche ★ 4.2k

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1.4k

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Cancer RWebServices SJava CoGAPS CRImage Rsubread Cancer RWebServices SJava CoGAPS

13.5 years ago Day, Roger S ▴ 60

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2.8k

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PROcess Rsamtools Rsubread TCC PROcess Rsamtools Rsubread TCC

13.7 years ago Thomas Girke ★ 1.7k

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2.5k

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Rsubread BiocInstaller

updated 13.8 years ago by Gordon Smyth 53k • written 13.8 years ago by Sang Chul Choi ▴ 230

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6.1k

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affxparser Rsubread BiocInstaller affxparser Rsubread BiocInstaller

updated 13.9 years ago by Wei Shi ★ 3.6k • written 13.9 years ago by NDowell ▴ 20

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1.2k

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Sequencing Alignment Rsubread Sequencing Alignment Rsubread

14.1 years ago Wei Shi ★ 3.6k

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2.6k

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Alignment Yeast Rsubread Alignment Yeast Rsubread

14.6 years ago • updated 14.5 years ago Wei Shi ★ 3.6k

208 results • Page 5 of 5

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Comment: After running samtools, the featureCounts command crashed. by eja.gssssse.r.m • 0

The buffer overflow detected error in your featureCount step usually indicates that the program is trying to write more data into memory …

Comment: gene Set with high AUC score but no cells assigned to cell type by eja.gssssse.r.m • 0

It sounds like your AUCell results may be showing high AUC scores without cell assignment due to thresholding or scoring cutoffs. Think of …

Answer: "Watched Tags" are being erased rather than updated by shepherl 4.2k

This should now be resolved

Answer: Question about collapsing ASVs by genus level during DESeq2 analysis by Michael Love 43k

I'll just note that microbiome stats folks tend to use other tools than DESeq2. > several ASVs belong to the same genus but are not iden…

Comment: Integration: Paired-end vs healthy single-end from a different source by igkryycpinmshzugby • 0

Yes, Option 1 (technical homogenization) reprocessing paired-end samples as single-end using only R1 is the most defensible approach when l…

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Bioconductor 3.22 Released!

Comment: "Watched Tags" are being erased rather than updated

Comment: deseq2 filter the low counts

Answer: DESeq2 interactions

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Popular Question to Fred Hutch (Recruiting) ▴ 40