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sailfish
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How to get DESeq2 sizefactors from data imported using tximport
deseq2
sailfish
tximport
updated 2.8 years ago by
IUH
• 0 • written 8.7 years ago by
stan
• 0
0
votes
6
replies
1.9k
views
Using tximport to read in data from sailfish experiment
tximport
sailfish
rnaseq
updated 9.3 years ago by
Michael Love
43k • written 9.3 years ago by
lina.faller
▴ 10
1
vote
5
replies
1.9k
views
Help inputing sailfish TPM files into tximport
tximport
sailfish
9.7 years ago
sjmonkley
▴ 40
7
votes
7
replies
3.9k
views
Using Sailfish estimated read-counts for DESeq2 analysis
deseq2
sailfish
differential gene expression
updated 11.3 years ago by
Simon Anders
★ 3.8k • written 11.3 years ago by
jceledon
• 0
4 results • Page
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Comment: Can sample-level weights be used when analysing GSVA scores in limma?
by
A.Barden
▴ 20
Thanks both for this useful information.
Comment: Reproducibility of code in various Bioconductor versions
by
Gordon Smyth
53k
SNPlocs.Hsapiens.dbSNP155.GRCh38 is available for download from the same location as always. It has not changed since Bioc 3.20: Presumabl…
Comment: Changing multiple display parameters of a specific exon in GeneRegionTrack
by
a2a2hd42aa
• 0
Similarly, for structural complexity in the [He777 Game][1] APK, having precise control over every detail is what makes a high-performance …
Answer: Issue loading and downloading Bioconductor 3.22 packages after update
by
strawberry3
• 0
Hi, thank you all for the advice. Using James's advice, I managed to install SNPlocs.Hsapiens.dbSNP155.GRCh38, but it took almost half an …
Answer: Issue loading and downloading Bioconductor 3.22 packages after update
by
James W. MacDonald
68k
As Robert and ATpoint have mentioned, you need to allow more time to download a large file like this. ``` > options(timeout = 5e5) > l…
Votes
Answer: Can sample-level weights be used when analysing GSVA scores in limma?
Answer: Can sample-level weights be used when analysing GSVA scores in limma?
Comment: Can sample-level weights be used when analysing GSVA scores in limma?
Answer: Issue loading and downloading Bioconductor 3.22 packages after update
Answer: Issue loading and downloading Bioconductor 3.22 packages after update
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