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Comment: Error: DESeq(dds , useT = TRUE, minmu = 1e-06, test = "LRT", : likelih
by
ATpoint
★
1.3k
Would you mind reading the vignette towards how the LRT works: http://bioconductor.org/packages/devel/bioc/vignettes/DESeq2/inst/doc/DESeq2…
Comment: cellCounts() function floating point error
by
Yang Liao
▴
340
Thanks for the report but the error cannot be reproduced. We tested `Rsubread` 2.10.3 in `R` 4.2.0 and `Bioconductor` 3.15, and `cellCounts…
Comment: rtracklayer export GRangesList as gtf and change attributes
by
James
•
0
I have found a way to export a GTF so that the 3rd column no longer lists **sequence_feature** but instead lists the feature, such as **exo…
Comment: Using Age or other numerical variable to model expression in deseq2
by
swbarnes2
★
1.1k
You can import age and not make it a factor.
Comment: Using Age or other numerical variable to model expression in deseq2
by
krushnach80
•
0
"Why is that" no as an example i was citing that.."certainly don't want to make the interaction between the nuisance variable and your vari…
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