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Error in "generateNull" with only one set of gene list
singscore generateNull
updated 8 months ago by • 0 • written 17 months ago by • 0
2
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4
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709
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Are singscore scores comparable between gene sets?
singscore GSVA GSEA subtypes geneset
updated 8 months ago by • 0 • written 2.5 years ago by ▴ 30
2 results • Page 1 of 1
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Comment: GenomicScores package: availableGScores and getGScores functions not working by nattzy94 • 0
EDIT: Ignore this, re-read the warning message in more detail (belatedly). I am now moving the cache. Thanks for the reply, I have since u…
Comment: DESeq2 Error: ncol(countData) == nrow(colData) is not TRUE by Michael Love 34k
See the tidy argument details.
Comment: DESeq2 Error: ncol(countData) == nrow(colData) is not TRUE by Ghida • 0
Hi Michael love, I am having the same problem. I made sure that my counts data is matrix and that the number of rows in the metadata is e…
Comment: How similar or disimilar are two sets of DEG? by ATpoint ▴ 850
Sounds like a job for gene set enrichment analysis, e.g. via http://bioconductor.org/packages/release/bioc/html/fgsea.html That will check…
Comment: Correct annotation of DGEList object from edgeR package regarding an RNA-Seq dat by IIart.hubII • 0
What is "coad_clear" in this case? What data have you allotted to it? Can you please share the whole code? Or can anyone answer this questi…
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Comment: "full model matrix is less than full rank"
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