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Showing :
snpmatrix
•
reset
0
votes
0
replies
886
views
major alterations to GGdata/GGtools planned
SNP
snpMatrix
cycle
SNP
snpMatrix
cycle
16.2 years ago
Vincent J. Carey, Jr.
6.7k
0
votes
1
reply
910
views
crlmm and snpMatrix
snpMatrix
crlmm
snpMatrix
crlmm
updated 13.9 years ago by
Benilton Carvalho
★ 4.3k • written 13.9 years ago by
Tim Rayner
▴ 270
0
votes
1
reply
1.1k
views
Problems Reading SNPs into snpMatrix
SNP
snpMatrix
SNP
snpMatrix
updated 13.0 years ago by
Vincent J. Carey, Jr.
6.7k • written 13.0 years ago by
Chris K. Fuller
▴ 10
0
votes
1
reply
1.5k
views
convert GGtools object (generated by vcf2sm) to snpMatrix class or other class
SNP
convert
GGtools
snpMatrix
SNP
convert
GGtools
snpMatrix
updated 12.9 years ago by
Vincent J. Carey, Jr.
6.7k • written 12.9 years ago by
Mao Jianfeng
▴ 290
0
votes
3
replies
2.8k
views
GWAS with Affymetrix SNP 6.0
SNP
oligo
snpMatrix
snpStats
SNP
oligo
snpMatrix
snpStats
updated 12.0 years ago by
Vincent J. Carey, Jr.
6.7k • written 12.0 years ago by
David Hervás
▴ 20
0
votes
6
replies
5.7k
views
Calculate heterozygosity % using SNP genotype data
SNP
snpMatrix
SNP
snpMatrix
updated 11.8 years ago by
Vincent J. Carey, Jr.
6.7k • written 11.8 years ago by
gowtham
▴ 210
0
votes
1
reply
1.4k
views
col.summary error in snpStats
SNP
Sequencing
Annotation
snpMatrix
snpStats
SNP
Sequencing
Annotation
snpMatrix
snpStats
updated 11.2 years ago by
Vincent J. Carey, Jr.
6.7k • written 11.2 years ago by
Tereza Jezkova - personal
▴ 10
0
votes
5
replies
3.7k
views
how to convert genotype snp matrix to nucleotide genotypes?
SNP
convert
snpMatrix
SNP
convert
snpMatrix
updated 11.0 years ago by
Vincent J. Carey, Jr.
6.7k • written 11.0 years ago by
Tereza Jezkova UNLV
▴ 20
0
votes
0
replies
1.8k
views
snpStats/GWASTools conversion
cdf
convert
snpMatrix
snpStats
GWASTools
cdf
convert
snpMatrix
snpStats
GWASTools
10.6 years ago
Stephanie M. Gogarten
▴ 870
0
votes
0
replies
511
views
Error in snpStats::read.pedfile: GeneGeneInter
snpmatrix
ped
6.4 years ago
GENOMIC_region
• 0
0
votes
0
replies
526
views
Parsing through snp matrix
snpmatrix
GGI
5.1 years ago
GENOMIC_region
• 0
11 results • Page
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Recent ...
Replies
Comment: How to run allelic imbalance in apeglm
by
euge.eugenio
▴ 20
@mikelove could you help me? Thanks!
Comment: ENCORI or starBase : ceRNA data retrieval using Web API and curl
by
ATpoint
★ 4.1k
This is not related to Bioconductor. Biostars is more suited where you posted already.
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
jane
• 0
Your material was totally correct, therefore I was able to learn what I needed to know. I'd want to convey my heartfelt gratitude for shari…
Comment: all variables in design formula must be columns in colData (Deseq2) error
by
Galina
• 0
thank you!
Comment: all variables in design formula must be columns in colData (Deseq2) error
by
ATpoint
★ 4.1k
coldata_rat <- data.frame(conditions=..., batch=...)
Votes
biomaRt not working - lazy table error
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
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euge.eugenio
▴ 20
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Dario Strbenac
★ 1.5k
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Vincent J. Carey, Jr.
6.7k
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Koen Van den Berge
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