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Showing :
snpmatrix
•
reset
0
votes
0
replies
825
views
Parsing through snp matrix
snpmatrix
GGI
6.9 years ago
GENOMIC_region
• 0
0
votes
0
replies
715
views
Error in snpStats::read.pedfile: GeneGeneInter
snpmatrix
ped
8.1 years ago
GENOMIC_region
• 0
0
votes
0
replies
2.3k
views
snpStats/GWASTools conversion
cdf
convert
snpMatrix
snpStats
GWASTools
cdf
convert
snpMatrix
snpStats
GWASTools
12.4 years ago
Stephanie M. Gogarten
▴ 890
0
votes
5
replies
4.5k
views
how to convert genotype snp matrix to nucleotide genotypes?
SNP
convert
snpMatrix
SNP
convert
snpMatrix
updated 12.8 years ago by
Vincent J. Carey, Jr.
6.7k • written 12.8 years ago by
Tereza Jezkova UNLV
▴ 20
0
votes
1
reply
1.8k
views
col.summary error in snpStats
SNP
Sequencing
Annotation
snpMatrix
snpStats
SNP
Sequencing
Annotation
snpMatrix
snpStats
updated 12.9 years ago by
Vincent J. Carey, Jr.
6.7k • written 12.9 years ago by
Tereza Jezkova - personal
▴ 10
0
votes
6
replies
7.1k
views
Calculate heterozygosity % using SNP genotype data
SNP
snpMatrix
SNP
snpMatrix
updated 13.6 years ago by
Vincent J. Carey, Jr.
6.7k • written 13.6 years ago by
gowtham
▴ 210
0
votes
3
replies
3.9k
views
GWAS with Affymetrix SNP 6.0
SNP
oligo
snpMatrix
snpStats
SNP
oligo
snpMatrix
snpStats
updated 13.7 years ago by
Vincent J. Carey, Jr.
6.7k • written 13.7 years ago by
David Hervás
▴ 20
0
votes
1
reply
1.9k
views
convert GGtools object (generated by vcf2sm) to snpMatrix class or other class
SNP
convert
GGtools
snpMatrix
SNP
convert
GGtools
snpMatrix
updated 14.7 years ago by
Vincent J. Carey, Jr.
6.7k • written 14.7 years ago by
Mao Jianfeng
▴ 290
0
votes
1
reply
1.4k
views
Problems Reading SNPs into snpMatrix
SNP
snpMatrix
SNP
snpMatrix
updated 14.8 years ago by
Vincent J. Carey, Jr.
6.7k • written 14.8 years ago by
Chris K. Fuller
▴ 10
0
votes
1
reply
1.2k
views
crlmm and snpMatrix
snpMatrix
crlmm
snpMatrix
crlmm
updated 15.7 years ago by
Benilton Carvalho
★ 4.3k • written 15.7 years ago by
Tim Rayner
▴ 270
0
votes
0
replies
1.1k
views
major alterations to GGdata/GGtools planned
SNP
snpMatrix
cycle
SNP
snpMatrix
cycle
17.9 years ago
Vincent J. Carey, Jr.
6.7k
11 results • Page
1 of 1
Recent ...
Replies
Comment: Question on processing compound protein groups in limpa
by
JKim
• 0
Many thanks. I appreciate your advice.
Answer: Question on processing compound protein groups in limpa
by
Gordon Smyth
53k
Different people have different ways of dealing with compound protein groups. You could just leave them in the analysis, in which case limp…
Answer: Correct usage of limpa for protein input
by
Gordon Smyth
53k
limpa can work on protein-level quantifications, but they must be intensity-based and must be on the log scale. From what I read (<https://…
Comment: A problem occurs when running the monocle2
by
a2a2hset32aa
• 0
Troubleshooting monocle2 errors in R 4.5.1 often points to package incompatibilities, particularly with newer versions of igraph. For resea…
Comment: Deadline Extended: EuroBioC2026 Call for Abstracts
by
a2a2hset32aa
• 0
Attending EuroBioC2026 is an excellent way for researchers to explore the intersection of technology and biology. For those seeking high qu…
Votes
Answer: Question on processing compound protein groups in limpa
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
A: Interpretaion of dendrogram height in WGCNA?
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