Bioconductor Spatiallibd

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spatialLIBD

updated 20 months ago by Leonardo Collado Torres ★ 1.0k • written 20 months ago by kstern • 0

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spatialLIBD

updated 20 months ago by Leonardo Collado Torres ★ 1.0k • written 20 months ago by kstern • 0

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spatialLIBD

updated 2.2 years ago by Leonardo Collado Torres ★ 1.0k • written 2.3 years ago by Ma • 0

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spatialLIBD

updated 2.7 years ago by Leonardo Collado Torres ★ 1.0k • written 2.8 years ago by Dimitri • 0

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biorxiv spatialLIBD News

written 4.2 years ago by Leonardo Collado Torres ★ 1.0k

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Answer: Dominance Index for Shotgun Metagenomics Data by Leo Lahti ▴ 40

1. Note that Simpson's dominance index (\lambda) is a different index than inverse Simpson (1/\lambda) or reciprocal Simpson (1-\lambda). T…

Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0

Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …

Answer: PCA plot suggestions by Michael Love 41k

For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…

Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10

Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…

Answer: Deseq2. decontXcounts not integers. Useful alternative? by Michael Love 41k

Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…

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