updated 5.3 years ago by
Michael Lawrence
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written 5.3 years ago by
Peter Hickey
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Comment: Gradient dotplot
by
sophieagger
•
0
That's smart, I'm a bit worried that it'll break my computer if I get enough levels in there to make me happy, but I'll give it a try.
Comment: EdgeR, tumor normal pair, no replicatie but multiple patients, to focus on indi
by
Field -Ye
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0
Hi Professor Smyth,
Thank you very much for the code. That has solved my problem. All the best.
Field
Comment: Understanding output of Negative Binomial in DESeq2
by
synat.keam
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0
Thank, Senior. sorry for cross posting as I was thinking in case I got different opinion, but the explanation was clear from Biostar. thank…
Comment: voom flips the sign relative to log(cpm)
by
Gordon Smyth
43k
Cross posted to Biostars https://www.biostars.org/p/9490039/
Answer: voom flips the sign relative to log(cpm)
by
Gordon Smyth
43k
The difference has nothing to do with limma or voom. On the right you applied TMM library size normalization. On the left you did no librar…
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