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syntenet
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Interprteting the phylogenomic profiles plot
syntenet
synteny
Network
written 2.5 years ago by
Alexandros
• 0
2
votes
8
replies
2.0k
views
Reading GFF file and pre-processing, run iinfer_syntenet(), input and output
syntenet
updated 16 months ago by
Sujeevan
• 0 • written 2.4 years ago by
lwanderson8c
• 0
0
votes
4
replies
616
views
Error in classify_gene_pairs
syntenet
doubletrouble
14 months ago
hfyuan2016
• 0
0
votes
3
replies
1.0k
views
Clustering coefficient of synteny network
Network
syntenet
Clustering
coefficient
22 months ago
Alexandros
• 0
0
votes
2
replies
932
views
MIcrosynteny block information - Syntenet
syntenet
microsynteny
blocks
synteny
written 22 months ago by
Alexandros
• 0
0
votes
1
reply
556
views
question about data processing for syntenet
syntenet
updated 14 months ago by
Fabricio Almeida-Silva
▴ 40 • written 16 months ago by
Sujeevan
• 0
0
votes
1
reply
525
views
Syntenet error in infer_syntenet() Error in blast_list[[1]] : subscript out of bounds
syntenet
updated 14 months ago by
Fabricio Almeida-Silva
▴ 40 • written 15 months ago by
Sujeevan
• 0
0
votes
1
reply
918
views
Syntenet application to bacterial genome and file processing
syntenet
Bacteria
synteny
updated 16 months ago by
Fabricio Almeida-Silva
▴ 40 • written 18 months ago by
kluongni
• 0
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Comment: Setting ylims in bam coverage plot and assigning compound sashimi numbers to ove
by
macdonaldfrench7286566
• 0
Regarding the ylim for the coverage [space waves][1], have you tried accessing the ylim slot of the CoverageTrack object after you've creat…
Comment: How to left_join a tidySummarizedExperiment with a GRanges object by seqnames an
by
Kateřina
• 0
I unfortunately haven't. Non-tidy grammar is fine, but I have wanted to use tidy-only grammar. Thank you nonetheless!
Comment: GAlignments Cigar to GRanges
by
pineiroalejandro
• 0
Wow, so easy! Thanks for your quick reply.
Comment: EuroBioC2023 abstract submission is open!
by
eilishhill8
• 0
Thanks for sharing this. I got it clearly now. Submit here: [https://openreview.net/group?id=bioconductor.org/EuroBioC/2023/][1] [melon sa…
Comment: European Bioconductor Conference 2023 planning
by
rasafreelancer
• 0
@[chill guy clicker][1] Sounds like a fantastic opportunity! I'm really curious about the emerging technologies that will be highlighted at…
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Answer: GAlignments Cigar to GRanges
Answer: GAlignments Cigar to GRanges
When running contrasts, does it use normalized read counts?
When running contrasts, does it use normalized read counts?
Importing Salmon counts with tximport with host and virus genomes
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