Biostar Coefficient

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resultsNames DESeq2 coefficient

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limma voom intercept coefficient

updated 5.5 years ago by James W. MacDonald 58k • written 5.5 years ago by rubi ▴ 100

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Answer: ERROR: unable to find an inherited method for function ‘dispersions<-’ for signa by Michael Love 35k

This is not the DESeq2 syntax, see vignette or functions man pages.

Comment: graphite package SSL certificate by x • 0

Thank you so much!

Answer: Where can I find EnsDb.Hsapiens.v105? by jon.klonowski ▴ 20

To ensure access to the most up to date EnsDb databases: 1. Make sure your Bioconductor is the most up to date by running `BiocManager::in…

Comment: LOC gene IDs for characterised genes in annotation files by James W. MacDonald 58k

The most updated gene names should come from that GTF file. ``` > library(rtracklayer) > library(GenomicFeatures) > z <- import("https://f…

Comment: LOC gene IDs for characterised genes in annotation files by Lan • 0

Hi Dr. MacDonald, thanks very much for your reply! I thought my question is very related to this post, so I piggybacked on here, but will t…

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Answer: Why is "SimpleList" not inheriting "list" ?

Answer: Where can I find EnsDb.Hsapiens.v105?

Comment: Where can I find EnsDb.Hsapiens.v105?

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