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tcgaworkflow
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Postdoc
TCGAWorkflow
21 months ago
sameerahmadguru
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Gene A mutation vs Gene B amplification using TCGA datasets
TCGAWorkflow
2.6 years ago
Begin-R
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tcga expression data
TCGAWorkflow
updated 3.2 years ago by
ATpoint
★ 5.0k • written 3.2 years ago by
fatemehfakhari74
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Query on TCGA
TCGAbiolinks
TCGAWorkflow
3.2 years ago
hemangininaik09
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Identifying presence of certain genes
DifferentialExpression
TCGAWorkflow
4.0 years ago
Sam
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Comment: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif
by
Matthew Thornton
▴ 380
WOW! Thank you so much for the information. I will do this.
Comment: "Watched Tags" are being erased rather than updated
by
RalphSavage99
• 0
Thanks for sharing https://github.com/Bioconductor/support.bioconductor.org/issues/112
Answer: Add additional maintainer for MOFA2
by
shepherl
4.2k
These requests are best on the bioc-devel @ r-project.org or a request to maintainer @ bioconductor.org -- We would ideally need the curre…
Answer: After running samtools, the featureCounts command crashed.
by
Kevin Blighe
★ 4.0k
Hi Rui Tang, The "buffer overflow detected" error in featureCounts usually stems from a corrupted or malformed GTF file, often due to tr…
Answer: Problem with the TMB plot
by
Kevin Blighe
★ 4.0k
Hi, The linear TMB plot with no clustering suggests your variant calls may lack sample-specific discrimination, likely due to filtering ap…
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Answer: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif
Using edgeR or DESeq2 to analyze allele-specific expression?
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
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