Bioconductor Tronco

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tronco

updated 8.6 years ago by Martin Morgan 25k • written 8.6 years ago by Ramon Diaz-Uriarte ▴ 70

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.MAF TRONCO capri

updated 8.8 years ago by gcaravagn • 0 • written 9.2 years ago by sgore83 • 0

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Answer: Handling Epic Array Data by James W. MacDonald 67k

You don't need a sample sheet. It is just a simple way to identify the Idat files and possibly include sample information. But you appear t…

Comment: preprocessIllumina error with EPICv2 array by Rakesh • 0

Amazing, thanks for the help!

Answer: Allele frequencies for ALL alleles of one SNP ? by Robert Castelo ★ 3.4k

Hi, the [GenomicScores](https://bioconductor.org/packages/GenomicSCores) package provides supporting infrastructure to create annotation re…

Answer: preprocessIllumina error with EPICv2 array by James W. MacDonald 67k

You shouldn't need to change the annotation, and certainly not like that. You should never need to use the `@` function directly - there ar…

Comment: CleanUpRNAseq with a GTF that is missing mitochondria annotation data by Haibo Liu • 0

Thank you for your reminder. I did forget that, but I just bumped the version to 1.1.1.

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Answer: preprocessIllumina error with EPICv2 array

Answer: UniProt.ws query loading indefinitely

Answer: Package needs internet access

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Scholar to James W. MacDonald 67k