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venndiagram
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Online Venn diagram generator where I can paste text files containing gene name lists to get the diagram
Venndiagram
files
text
15 months ago
ratto
• 0
0
votes
0
replies
731
views
draw.pairwise.venn: Misplaced line connecting external area label
venndiagram
5.5 years ago
salamandra
▴ 20
1
vote
4
replies
1.0k
views
Remove box frame from vennDiagram plot in limma
Limma
venndiagram
r
updated 2.4 years ago by
luca.soldini
• 0 • written 5.7 years ago by
bajwa.m
• 0
1
vote
4
replies
1.5k
views
venDiagram after limma showing more genes after specifying up or down regulated specifically
venn diagram
venndiagram
limma
microarray
differential expression
updated 5.8 years ago by
James W. MacDonald
65k • written 5.8 years ago by
A
▴ 40
1
vote
2
replies
1.8k
views
How to scale circle sizes in VennDiagram using draw.triple.venn
VennDiagram
venn diagram
circle size
draw.triple.venn
updated 7.4 years ago by
James W. MacDonald
65k • written 7.4 years ago by
Gary
▴ 20
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Answer: Once again a "Model matrix not full rank"
by
swbarnes2
★ 1.3k
Replicate numbers, like the 1 in control_1 are fine in sample names, but never add them to anything else in colData. From the computer's p…
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
Gordon Smyth
50k
I'll add a little bit of general advice to James' answer. You seem to have the misunderstanding that you can change the design matrix but …
Answer: package goseq seems to be not available on the latest version of R
by
Gordon Smyth
50k
It is true that goseq isn't available for Bioc 3.19. That is because goseq depends on txbmaker, which is itself not yet available for Bioc…
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
James W. MacDonald
65k
This part: ``` design_intercept <- model.matrix(~Alt+Sex+Age+PC1, data=targets_Sherpa) colnames(design_intercept) <- c("AltSHP_LA","Al…
Comment: CombineArrays for EPIC and EPIC V2
by
Kim
• 0
Thank you Tim, this is a great help in getting me started!
Votes
Answer: limma Intercept vs No-intercept models completely changing DMR results?
Answer: CombineArrays for EPIC and EPIC V2
Answer: Too many significant genes when integrating gtex and tcga
Comment: Too many significant genes when integrating gtex and tcga
A: Print Differentially Expressed Exons From Dexseq Results
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