Bioconductor Write.fit

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limma write.fit

updated 6.4 years ago by Gordon Smyth 52k • written 6.4 years ago by payam_delfani1980 • 0

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limma write.fit

updated 6.6 years ago by Adam Travis • 0 • written 6.6 years ago by tillmann.ruland • 0

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limma write.fit method nestedF

updated 6.7 years ago by Gordon Smyth 52k • written 7.3 years ago by aec ▴ 90

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Comment: How to sort negative log2FC or FC in RNAseq for GSEA? by Quang NN ▴ 10

Thank you so much for taking time to provide this clarification!

Comment: How can I generate a heatmap and clustering of differentially expressed genes in by Renuka • 0

Thanks Kelvin i had same doubt .Do i need to do log2 (FPKMcounts) for this

Comment: Is there a way to do DEG analysis across two batches sharing one sample only? by georgeyu703 • 0

Michael, Thank you very much!

Comment: Is there a way to do DEG analysis across two batches sharing one sample only? by Michael Love 43k

Yes, with the knowledge that, it is expected to be underpowered.

Comment: Is there a way to do DEG analysis across two batches sharing one sample only? by georgeyu703 • 0

Thank you, Michael. How? Could you provide more details? Can I just do it as usual, I mean to include batch in the model?

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Answer: EdgeR Biological CVs

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