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1.2k
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how to save picture and add title to waterfall GenVisR mutation analyse?
GenVisr
genvisr
waterfall
mutation
updated 6.0 years ago by
zlskidmore
▴ 30 • written 6.0 years ago by
ZihaoXing
• 0
0
votes
1
reply
3.8k
views
Comment:
C: the results of logFC is base e (log(FC,base=exp(1)) or base 2 (log2FC) ,is logFC
6.2 years ago
ZihaoXing
• 0
1
vote
3
replies
3.8k
views
the results of logFC is base e (log(FC,base=exp(1)) or base 2 (log2FC) ,is logFC same as log2FC in edgeR?
edger
limma
logfc
updated 22 months ago by
Gordon Smyth
51k • written 6.2 years ago by
ZihaoXing
• 0
0
votes
0
replies
1.4k
views
Comment:
C: how to output and get the normalization gene expression data (similar to the FPK
6.2 years ago
ZihaoXing
• 0
0
votes
0
replies
2.3k
views
Comment:
C: why the logFC is different between edgeR,DESeq2 results and fpkm logFC(log2(FPKM
6.2 years ago
ZihaoXing
• 0
0
votes
0
replies
2.3k
views
Comment:
C: why the logFC is different between edgeR,DESeq2 results and fpkm logFC(log2(FPKM
6.2 years ago
ZihaoXing
• 0
2
votes
4
replies
2.3k
views
why the logFC is different between edgeR,DESeq2 results and fpkm logFC(log2(FPKM_tumor_mean/FPKM_normal_mean)?
deseq2
edger
fpkm
counts
fc
updated 6.2 years ago by
Gordon Smyth
51k • written 6.2 years ago by
ZihaoXing
• 0
1
vote
2
replies
1.4k
views
how to output and get the normalization gene expression data (similar to the FPKM gene expression data) from reads count data by DESeq2 and edgeR?
deseq2
edger
fpkm
counts
TCGA
updated 6.2 years ago by
Gordon Smyth
51k • written 6.2 years ago by
ZihaoXing
• 0
0
votes
0
replies
901
views
Comment:
C: can i only analyse some genes different RNAseq expression analyse not the whole
updated 6.2 years ago by
Gordon Smyth
51k • written 6.2 years ago by
ZihaoXing
• 0
0
votes
0
replies
901
views
Comment:
C: can i only analyse some genes different RNAseq expression analyse not the whole
6.2 years ago
ZihaoXing
• 0
1
vote
5
replies
901
views
can i only analyse some genes different RNAseq expression analyse not the whole transcriptome RNAseq analyse by DESeq2 or edgeR
deseq2
edger
updated 6.2 years ago by
Gordon Smyth
51k • written 6.2 years ago by
ZihaoXing
• 0
1
vote
2
replies
2.6k
views
why the p value and FDR is different between classic exactTest and glm glmQLFTest in edgeR?
edger
updated 6.2 years ago by
James W. MacDonald
67k • written 6.2 years ago by
ZihaoXing
• 0
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