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Updated affy package? ReadAffy/ AffyBatch has changed and breaks my pipeline!
Cancer cdf probe affy gcrma AnnotationDbi Cancer cdf probe affy gcrma AnnotationDbi
13.1 years ago Benjamin Otto ▴ 830
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R/Bioconductor CDF to Affymetrix CDF
cdf convert cdf convert
updated 13.5 years ago by ▴ 10 • written 13.5 years ago by ▴ 830
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889
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AffyProbeMiner Mouse 4302 geneccds CDF file
cdf cdf
13.8 years ago Benjamin Otto ▴ 830
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Answer: A: Unambiguously mapping of affy IDs to gene symbols using hgu133plus2.db
14.5 years ago Benjamin Otto ▴ 830
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Bootstrapping paired samples and tiny groups
ASSIGN ASSIGN
updated 14.5 years ago by ★ 6.0k • written 14.6 years ago by ▴ 830
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Answer: A: Error in Heatmap: Could not find function "heatmap.2"
14.7 years ago Benjamin Otto ▴ 830
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Comment: C: problem about hgu133plus2 annotation
14.7 years ago Benjamin Otto ▴ 830
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2.8k
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Comment: C: Heatmap.2 scale problems: Sacling inside the function gives different results th
14.7 years ago Benjamin Otto ▴ 830
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2.8k
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Comment: C: Heatmap.2 scale problems: Sacling inside the function gives different results th
14.7 years ago Benjamin Otto ▴ 830
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Answer: A: Cross Platform Array Mapping
14.8 years ago Benjamin Otto ▴ 830
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1.3k
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No changes between Groups using GeneST Arrays from Affymetrix
GO vsn plier GO vsn plier
updated 14.9 years ago by ▴ 230 • written 15.0 years ago by ▴ 830
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Comment: C: makecdfenv crashes
16.3 years ago Benjamin Otto ▴ 830
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1.4k
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Comment: C: how to combine microarray data and phenotype data into a least squares analysis?
16.5 years ago Benjamin Otto ▴ 830
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1
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1.8k
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Comment: C: PCR Validation threshold in dChip normalized data
16.6 years ago Benjamin Otto ▴ 830
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Answer: A: PCR Validation threshold in dChip normalized data
16.6 years ago Benjamin Otto ▴ 830
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4
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1.8k
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PCR Validation threshold in dChip normalized data
updated 16.6 years ago by 21k • written 16.6 years ago by ▴ 830
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16k
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Comment: C: How to adjust the Heatmap.2 color key
16.7 years ago Benjamin Otto ▴ 830
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16k
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Comment: C: How to adjust the Heatmap.2 color key
16.7 years ago Benjamin Otto ▴ 830
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1
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16k
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Answer: A: How to adjust the Heatmap.2 color key
16.7 years ago Benjamin Otto ▴ 830
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1
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2.1k
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Comment: C: gains and losses via mode shifting
16.8 years ago Benjamin Otto ▴ 830
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2.1k
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Comment: C: gains and losses via mode shifting
16.8 years ago Benjamin Otto ▴ 830
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2.1k
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Answer: A: gains and losses via mode shifting
16.8 years ago Benjamin Otto ▴ 830
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1.5k
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Comment: C: gains and losses via mode shifting
16.8 years ago Benjamin Otto ▴ 830
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5
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1.5k
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gains and losses via mode shifting
CGH CGH
updated 16.8 years ago by 21k • written 16.8 years ago by ▴ 830
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645
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Promotor enrichment analysis
17.0 years ago Benjamin Otto ▴ 830
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1
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1.0k
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RMA biomodality, distribution and transformation
updated 17.2 years ago by ▴ 340 • written 17.2 years ago by ▴ 830
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3
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3.0k
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Minimal group sizes in permutation tests
updated 17.4 years ago by ▴ 340 • written 17.4 years ago by ▴ 830
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2.2k
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Comment: C: segmentation for Affy SNP arrays
17.5 years ago Benjamin Otto ▴ 830
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0
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3.9k
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Comment: C: p.adjust returns one uniform value
17.6 years ago Benjamin Otto ▴ 830
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2
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3.9k
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p.adjust returns one uniform value
updated 17.6 years ago by ★ 2.2k • written 17.6 years ago by ▴ 830
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15
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3.0k
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heatmap.2
updated 17.6 years ago by ▴ 140 • written 17.7 years ago by ▴ 830
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1
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1.5k
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Imputation problem in aCGH
aCGH Biobase multtest impute aCGH aCGH Biobase multtest impute aCGH
17.7 years ago Benjamin Otto ▴ 830
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1.5k
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Answer: A: Imputation problem in aCGH
17.7 years ago Benjamin Otto ▴ 830
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1
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1.2k
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Comment: C: Tools for Combining Affy and aCGH data
17.7 years ago Benjamin Otto ▴ 830
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0
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1.1k
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Pvalue permutation of Linear regression
Regression Regression
17.7 years ago Benjamin Otto ▴ 830
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5
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1.6k
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Manufacturer ids in lumiHumanV1
Annotation lumiHumanV1 annotate lumi Annotation lumiHumanV1 annotate lumi
updated 17.7 years ago by ★ 1.2k • written 17.7 years ago by ▴ 830
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657
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Answer: A: how to see the content of a bioconductor function?
17.7 years ago Benjamin Otto ▴ 830
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0
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859
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Regressions in multtest
Regression Regression
17.7 years ago Benjamin Otto ▴ 830
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1.9k
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Comment: C: Gene Database Files (eg gene2accession) complete?
18.1 years ago Benjamin Otto ▴ 830
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3
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1.9k
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Gene Database Files (eg gene2accession) complete?
updated 18.1 years ago by ▴ 870 • written 18.1 years ago by ▴ 830
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1
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1.1k
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Comment: C: libraries or commands to help with parsing or handling web based database querie
18.1 years ago Benjamin Otto ▴ 830
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3
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1.9k
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Z-score
updated 18.1 years ago by ▴ 280 • written 18.1 years ago by ▴ 830
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1.4k
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Comment: C: AnnBuilders paseData() doesn't recognize ACCs with underscore?
18.2 years ago Benjamin Otto ▴ 830
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1.4k
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Comment: C: AnnBuilders paseData() doesn't recognize ACCs with underscore?
18.2 years ago Benjamin Otto ▴ 830
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5
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1.4k
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AnnBuilders paseData() doesn't recognize ACCs with underscore?
updated 18.2 years ago by ★ 2.9k • written 18.2 years ago by ▴ 830
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0
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1.4k
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Answer: A: AnnBuilders paseData() doesn't recognize ACCs with underscore?
18.2 years ago Benjamin Otto ▴ 830
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1
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985
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AnnBuilder error: parseData can't access some tmp file
AnnBuilder PROcess biomaRt AnnBuilder PROcess biomaRt
updated 18.3 years ago by ▴ 870 • written 18.3 years ago by ▴ 830
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0
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1.6k
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Comment: C: Where do I find the golub_Train dataset?
18.3 years ago Benjamin Otto ▴ 830
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2
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1.6k
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Comment: C: Where do I find the golub_Train dataset?
18.3 years ago Benjamin Otto ▴ 830
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7
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1.6k
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Where do I find the golub_Train dataset?
updated 18.3 years ago by ★ 7.4k • written 18.3 years ago by ▴ 830
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