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Doing differential expression using FPKM , samples don't have replication
dge fpkm rna-seq
updated 2.9 years ago by ★ 3.9k • written 2.9 years ago by • 0
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1
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1.8k
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Comment: C: How to filter tximport output for edgeR?
5.2 years ago lkianmehr • 0
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1
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2.8k
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Comment: C: what should I do with many zero counts from Salmon quantification
5.3 years ago lkianmehr • 0
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0
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2.8k
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Comment: C: what should I do with many zero counts from Salmon quantification
5.3 years ago lkianmehr • 0
0
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1
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2.8k
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Comment: C: what should I do with many zero counts from Salmon quantification
5.3 years ago lkianmehr • 0
0
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1
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2.8k
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Comment: C: what should I do with many zero counts from Salmon quantification
5.3 years ago lkianmehr • 0
0
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1
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2.8k
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Comment: C: what should I do with many zero counts from Salmon quantification
5.3 years ago lkianmehr • 0
4
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10
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2.8k
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what should I do with many zero counts from Salmon quantification
Salmon DESeq2 normalization r
updated 5.3 years ago by 41k • written 5.3 years ago by • 0
1
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1
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629
views
different observation of DEG for same group
deseq2 DE
updated 5.3 years ago by 41k • written 5.3 years ago by • 0
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0
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897
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quantifying piRNA and tRNA by Salmon
Salmon DGE
5.5 years ago lkianmehr • 0
2
votes
1
reply
586
views
How tximport summerize transcript-level abundance to gene-level
tximport
updated 5.5 years ago by 41k • written 5.5 years ago by • 0
0
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1
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986
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Comment: C: plot of normalized counts for a single gene
5.5 years ago lkianmehr • 0
0
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1
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986
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Comment: C: plot of normalized counts for a single gene
5.5 years ago lkianmehr • 0
0
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0
replies
986
views
Comment: C: plot of normalized counts for a single gene
5.5 years ago lkianmehr • 0
0
votes
1
reply
986
views
Comment: C: plot of normalized counts for a single gene
5.5 years ago lkianmehr • 0
1
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8
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986
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plot of normalized counts for a single gene
deseq2
5.5 years ago lkianmehr • 0
2
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1
reply
2.4k
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How get genename by tximport
tximport genename
updated 5.5 years ago by 41k • written 5.5 years ago by • 0
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1
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2.0k
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Problem with writing CollapseReplicates command
DESeq2
updated 5.7 years ago by 41k • written 5.7 years ago by • 0
0
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0
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912
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Comment: C: how do compare with DESeq2
5.7 years ago lkianmehr • 0
0
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1
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912
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Comment: C: how do compare with DESeq2
updated 5.7 years ago by 41k • written 5.7 years ago by • 0
0
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4
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912
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how do compare with DESeq2
deseq2
updated 5.7 years ago by 41k • written 5.7 years ago by • 0
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