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questions
0
votes
2
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913
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organism name error with makeTxDbPackageFromUCSC()
makeTxDbPackageFromUCSC
genomicfeatures
7.2 years ago
Ugo Borello
▴ 340
0
votes
4
replies
1.5k
views
systemPipeR with DESeq2
deseq2
systemPipeR
9.5 years ago
Ugo Borello
▴ 340
0
votes
4
replies
1.8k
views
ChiPQC and paired-end data
ChIPQC
ChIPQC
updated 9.8 years ago by
Carroll, Thomas
▴ 20 • written 9.8 years ago by
Ugo Borello
▴ 340
0
votes
7
replies
3.5k
views
NCBI gff3 annotation file and read.gff()
updated 9.8 years ago by
Martin Morgan
25k • written 9.8 years ago by
Ugo Borello
▴ 340
0
votes
3
replies
1.8k
views
ReportingTools and gene annotation
Annotation
GO
cycle
ReportingTools
DESeq2
Annotation
GO
cycle
ReportingTools
DESeq2
updated 10.2 years ago by
James W. MacDonald
65k • written 10.2 years ago by
Ugo Borello
▴ 340
1
vote
2
replies
3.9k
views
DESeq2 multifactorial formula
DESeq2
DESeq2
updated 10.5 years ago by
Michael Love
41k • written 10.5 years ago by
Ugo Borello
▴ 340
0
votes
7
replies
2.6k
views
QuasR on Linux Cluster
BSgenome
BSgenome
QuasR
BSgenome
BSgenome
QuasR
updated 10.5 years ago by
Michael Stadler
▴ 350 • written 10.6 years ago by
Ugo Borello
▴ 340
0
votes
0
replies
1.7k
views
Bsgenome gap mask conundrum
BSgenome
BSgenome
BSgenome
BSgenome
10.8 years ago
Ugo Borello
▴ 340
0
votes
2
replies
1.5k
views
Blast a BSgenome
BSgenome
BSgenome
BSgenome
BSgenome
updated 10.8 years ago by
Hervé Pagès
16k • written 10.8 years ago by
Ugo Borello
▴ 340
0
votes
10
replies
2.8k
views
MakeTranscriptDbFromGFF
Annotation
TranscriptDb
Annotation
TranscriptDb
updated 11.0 years ago by
Marc Carlson
★ 7.2k • written 11.0 years ago by
Ugo Borello
▴ 340
0
votes
2
replies
1.2k
views
QuasR special case alignment
Alignment
QuasR
Alignment
QuasR
updated 11.0 years ago by
Michael Stadler
▴ 350 • written 11.0 years ago by
Ugo Borello
▴ 340
0
votes
2
replies
1.2k
views
matchPWM() questions
Transcription
Transcription
updated 11.2 years ago by
Hervé Pagès
16k • written 11.2 years ago by
Ugo Borello
▴ 340
1
vote
1
reply
3.3k
views
Aligning short reads to a single gene
updated 11.2 years ago by
Wei Shi
★ 3.6k • written 11.2 years ago by
Ugo Borello
▴ 340
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