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0
votes
6
replies
1.6k
views
difficulty loading rsbml
rsbml rsbml
updated 6.2 years ago by • 0 • written 11.4 years ago by ★ 1.1k
0
votes
0
replies
646
views
RCytoscape error with deleteSelectedEdges
RCytoscape RCytoscape
11.2 years ago Paul Shannon ★ 1.1k
0
votes
0
replies
599
views
graph classes: how to combine multiple graphs into a single graph
graph graph
11.3 years ago Paul Shannon ★ 1.1k
0
votes
0
replies
997
views
Comment: C: [R] RCytoscape setPosition error
11.3 years ago Paul Shannon ★ 1.1k
0
votes
1
reply
997
views
Comment: C: [R] RCytoscape setPosition error
11.4 years ago Paul Shannon ★ 1.1k
0
votes
4
replies
997
views
[R] RCytoscape setPosition error
Network Cancer graph Network Cancer graph
updated 11.4 years ago by ▴ 250 • written 11.4 years ago by ★ 1.1k
0
votes
2
replies
898
views
graph classes: how to combine multiple graphs into a single graph
graph graph
updated 11.4 years ago by ▴ 340 • written 11.4 years ago by ★ 1.1k
0
votes
2
replies
1.6k
views
Comment: C: difficulty loading rsbml
11.4 years ago Paul Shannon ★ 1.1k
0
votes
1
reply
640
views
names of edges in graph classes
updated 11.5 years ago by ▴ 340 • written 11.5 years ago by ★ 1.1k
0
votes
0
replies
669
views
Answer: A: Rgraphviz running problem on vista
11.5 years ago Paul Shannon ★ 1.1k
0
votes
1
reply
725
views
Answer: A: graph::join discards node and edge attributes
11.6 years ago Paul Shannon ★ 1.1k
0
votes
0
replies
482
views
graph::join discards node and edge attributes
graph graph
11.6 years ago Paul Shannon ★ 1.1k
0
votes
0
replies
567
views
Comment: C: obtain a list of possible oncogenes from the annotation packages?
11.6 years ago Paul Shannon ★ 1.1k
0
votes
2
replies
567
views
obtain a list of possible oncogenes from the annotation packages?
Annotation Annotation
updated 11.6 years ago by 13k • written 11.6 years ago by ★ 1.1k
0
votes
0
replies
1.3k
views
seeking advice on analyzing CGH data
aCGH CGH aCGH aCGH CGH aCGH
11.6 years ago Paul Shannon ★ 1.1k
0
votes
1
reply
939
views
Answer: A: RCytoscape performance
11.6 years ago Paul Shannon ★ 1.1k
0
votes
2
replies
573
views
rtracklayer 'track' method, a viewLimits parameter?
rtracklayer IRanges rtracklayer IRanges
updated 11.7 years ago by 11k • written 11.7 years ago by ★ 1.1k
0
votes
1
reply
918
views
Comment: C: rtracklayer 'track' method, a viewLimits parameter?
11.7 years ago Paul Shannon ★ 1.1k
0
votes
4
replies
918
views
rtracklayer 'track' method, a viewLimits parameter?
rtracklayer rtracklayer
updated 11.7 years ago by 11k • written 11.7 years ago by ★ 1.1k
0
votes
1
reply
794
views
Comment: C: intermittent oddity in rtracklayer track names
11.7 years ago Paul Shannon ★ 1.1k
0
votes
1
reply
794
views
Comment: C: intermittent oddity in rtracklayer track names
11.7 years ago Paul Shannon ★ 1.1k
0
votes
5
replies
794
views
intermittent oddity in rtracklayer track names
trigger trigger
updated 11.7 years ago by 11k • written 11.7 years ago by ★ 1.1k
0
votes
1
reply
706
views
Comment: C: rtracklayer -- how to hide some default tracks? fine-grained control of track vi
11.7 years ago Paul Shannon ★ 1.1k
0
votes
3
replies
706
views
rtracklayer -- how to hide some default tracks? fine-grained control of track view mode (pack, full, dense, squish...)
BSgenome BSgenome BSgenome BSgenome
updated 11.7 years ago by 11k • written 11.7 years ago by ★ 1.1k
0
votes
0
replies
633
views
Comment: C: GRangesForUCSCGenome seems to be missing in rtracklayer 1.10, GenomicRanges 1.2
11.7 years ago Paul Shannon ★ 1.1k
0
votes
4
replies
633
views
GRangesForUCSCGenome seems to be missing in rtracklayer 1.10, GenomicRanges 1.2
BSgenome BSgenome rtracklayer BSgenome BSgenome rtracklayer
updated 11.7 years ago by 6.6k • written 11.7 years ago by ★ 1.1k
0
votes
1
reply
633
views
Comment: C: GRangesForUCSCGenome seems to be missing in rtracklayer 1.10, GenomicRanges 1.2
11.7 years ago Paul Shannon ★ 1.1k
0
votes
0
replies
585
views
grid.chromosome in quantsmooth, without cytobands?
idiogram idiogram
11.7 years ago Paul Shannon ★ 1.1k
0
votes
1
reply
513
views
Biostrings pdf, missing? 'Efficient genome searching with Biostrings and the BSgenome data package'
Preprocessing BSgenome Biostrings BSgenome Preprocessing BSgenome Biostrings BSgenome
updated 11.7 years ago by ★ 8.2k • written 11.7 years ago by ★ 1.1k
0
votes
4
replies
854
views
unmapped keys in hugene10stprobeset.db
Annotation affy Annotation affy
updated 11.9 years ago by ★ 7.2k • written 11.9 years ago by ★ 1.1k
0
votes
8
replies
1.3k
views
CRytoscape: an early release
convert convert
updated 11.9 years ago by ★ 1.9k • written 12.0 years ago by ★ 1.1k
0
votes
1
reply
1.3k
views
Comment: C: CRytoscape: an early release
11.9 years ago Paul Shannon ★ 1.1k
0
votes
1
reply
1.3k
views
Comment: C: CRytoscape: an early release
12.0 years ago Paul Shannon ★ 1.1k
0
votes
2
replies
1000
views
proposed: a bridge between R and Cytoscape
Visualization Network graph Visualization Network graph
updated 12.0 years ago by 13k • written 12.0 years ago by ★ 1.1k
0
votes
5
replies
656
views
anybody parsing BioPAX 2?
Pathways Pathways
updated 12.1 years ago by ▴ 10 • written 12.1 years ago by ★ 1.1k
0
votes
1
reply
656
views
Comment: C: anybody parsing BioPAX 2?
12.1 years ago Paul Shannon ★ 1.1k
0
votes
8
replies
1.4k
views
'SRAdb useful for visualizing BAM files'
SRAdb SRAdb
updated 12.2 years ago by ▴ 170 • written 12.2 years ago by ★ 1.1k
0
votes
1
reply
729
views
rtracklayer 1.6: invalid class "ucscCart" object
hgu133plus2 rtracklayer hgu133plus2 rtracklayer
updated 12.2 years ago by 11k • written 12.2 years ago by ★ 1.1k
0
votes
0
replies
949
views
Comment: C: load failed for 'Rlibstree'
12.2 years ago Paul Shannon ★ 1.1k
0
votes
2
replies
949
views
Comment: C: load failed for 'Rlibstree'
12.2 years ago Paul Shannon ★ 1.1k
0
votes
6
replies
949
views
load failed for 'Rlibstree'
hgu133plus2 rtracklayer hgu133plus2 rtracklayer
updated 12.2 years ago by ★ 7.4k • written 12.2 years ago by ★ 1.1k
0
votes
4
replies
1.1k
views
fast iterator over DNAString's?
updated 12.3 years ago by ▴ 970 • written 12.3 years ago by ★ 1.1k
0
votes
1
reply
654
views
concurrent R-release & R-devel versions -- bioc also? [was Re: from TF DNA binding motif to downstream genes?]
Transcription GO celegans BSgenome Biostrings BSgenome IRanges Transcription GO celegans
updated 12.4 years ago by 21k • written 12.4 years ago by ★ 1.1k
0
votes
1
reply
1.1k
views
Comment: C: from TF DNA binding motif to downstream genes?
12.5 years ago Paul Shannon ★ 1.1k
0
votes
5
replies
1.1k
views
from TF DNA binding motif to downstream genes?
Transcription Biostrings Transcription Biostrings
updated 12.5 years ago by 1.6k • written 12.5 years ago by ★ 1.1k
0
votes
2
replies
966
views
KEGGgraph: any way to obtain 'outcome' nodes?
Pathways KEGGgraph Pathways KEGGgraph
updated 12.5 years ago by ▴ 270 • written 12.5 years ago by ★ 1.1k
0
votes
0
replies
687
views
Comment: C: data (golub) in the CMA vignette (version 1.4.0)
12.6 years ago Paul Shannon ★ 1.1k
0
votes
2
replies
687
views
data (golub) in the CMA vignette (version 1.4.0)
CMA CMA
updated 12.6 years ago by 6.6k • written 12.6 years ago by ★ 1.1k
0
votes
1
reply
589
views
no 'strands' method on GenomicData in 2.5?
hgu133plus2 rtracklayer IRanges hgu133plus2 rtracklayer IRanges
updated 12.9 years ago by ▴ 620 • written 12.9 years ago by ★ 1.1k
0
votes
2
replies
572
views
rtracklayer no longer uses TrackSet?
rtracklayer rtracklayer
updated 13.0 years ago by ▴ 620 • written 13.0 years ago by ★ 1.1k
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