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Comment: Comment: Ranking the GSEA Results
23 days ago alserg ▴ 270
1
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2
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658
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Comment: Comment: Ranking the GSEA Results
23 days ago alserg ▴ 270
0
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0
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667
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Comment: Comment: FGSEA pre-ranked input in increasing order or decreasing
6 weeks ago alserg ▴ 270
0
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0
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667
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Comment: Comment: FGSEA pre-ranked input in increasing order or decreasing
6 weeks ago alserg ▴ 270
2
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1
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403
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Answer: Answer: Perform gene set enrichment analysis using fgsea on two conditions that don't ha
12 weeks ago alserg ▴ 270
0
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1
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667
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Comment: Comment: FGSEA pre-ranked input in increasing order or decreasing
3 months ago alserg ▴ 270
0
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2
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667
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Answer: Answer: FGSEA pre-ranked input in increasing order or decreasing
3 months ago alserg ▴ 270
0
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1
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527
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Comment: Comment: fgsea fork
3 months ago alserg ▴ 270
1
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0
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2.5k
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Comment: Comment: Implementation of the "original" GSEA algorithm in R
19 months ago alserg ▴ 270
3
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1
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2.5k
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Answer: Answer: Implementation of the "original" GSEA algorithm in R
19 months ago alserg ▴ 270
0
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0
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2.2k
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Comment: Comment: Problem with fgsea
2.3 years ago alserg ▴ 270
1
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0
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1.9k
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Comment: Comment: Compute fgsea with my own database with R version 4.0.2
3.2 years ago alserg ▴ 270
1
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1
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1.9k
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Answer: Answer: Compute fgsea with my own database with R version 4.0.2
3.2 years ago alserg ▴ 270
2
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0
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4.6k
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Answer: Answer: Warning with the example of GSEA
3.3 years ago alserg ▴ 270
0
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0
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1.2k
views
Answer: A: do expression of leading edges within a negative NES term reflect the same direc
4.1 years ago alserg ▴ 270
1
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1
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1.6k
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Answer: A: what does gseaparam argument in fgsea() means?
4.1 years ago alserg ▴ 270
0
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0
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2.9k
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Comment: C: GSEA for RNA-seq analysis
5.8 years ago alserg ▴ 270
0
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1
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2.9k
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Comment: C: GSEA for RNA-seq analysis
6.0 years ago alserg ▴ 270
0
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1
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3.1k
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Comment: C: fgsea p-values are mostly the same upon analysis
6.0 years ago alserg ▴ 270
0
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1
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1.9k
views
Answer: A: Issues in generating workable rank file for GSEA
6.1 years ago alserg ▴ 270
1
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1
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1.9k
views
Comment: C: ReactomePA / Reactome: GSEA error message
6.1 years ago alserg ▴ 270
0
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1
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3.0k
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Comment: C: Does fgsea order the stats argument?
6.4 years ago alserg ▴ 270
0
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0
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1.7k
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Comment: C: BiocParallel: zombie processes on FORK cluster
6.5 years ago alserg ▴ 270
0
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0
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1.7k
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Comment: C: BiocParallel: zombie processes on FORK cluster
6.5 years ago alserg ▴ 270
3
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3
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1.7k
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BiocParallel: zombie processes on FORK cluster
biocparallel parallel
updated 6.5 years ago by 25k • written 6.5 years ago by ▴ 270
2
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0
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3.5k
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Answer: A: GSEA using clusterprofileR
6.8 years ago alserg ▴ 270
0
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1
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3.0k
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Comment: C: Does fgsea order the stats argument?
6.9 years ago alserg ▴ 270
0
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1
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2.2k
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Comment: C: FGSEA only runs with <1000 permutations
7.0 years ago alserg ▴ 270
0
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0
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2.2k
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Comment: C: FGSEA only runs with <1000 permutations
7.0 years ago alserg ▴ 270
1
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1
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2.2k
views
Answer: A: FGSEA only runs with <1000 permutations
7.0 years ago alserg ▴ 270
0
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0
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1.1k
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Answer: A: Retrieve the reactome ID of a protein
7.0 years ago alserg ▴ 270
0
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1
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3.0k
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Comment: C: Does fgsea order the stats argument?
7.1 years ago alserg ▴ 270
0
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0
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3.0k
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Answer: A: Does fgsea order the stats argument?
7.1 years ago alserg ▴ 270
1
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1
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3.1k
views
Comment: C: Change in pathway IDs scheme in reactome.db
7.3 years ago alserg ▴ 270
0
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1
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3.1k
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Comment: C: Change in pathway IDs scheme in reactome.db
7.3 years ago alserg ▴ 270
1
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0
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3.1k
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Comment: C: Change in pathway IDs scheme in reactome.db
7.3 years ago alserg ▴ 270
0
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2
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3.1k
views
Comment: C: Change in pathway IDs scheme in reactome.db
7.3 years ago alserg ▴ 270
0
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1
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3.1k
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Comment: C: Change in pathway IDs scheme in reactome.db
7.3 years ago alserg ▴ 270
0
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1
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3.1k
views
Comment: C: Change in pathway IDs scheme in reactome.db
7.3 years ago alserg ▴ 270
1
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1
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3.1k
views
Comment: C: Change in pathway IDs scheme in reactome.db
7.3 years ago alserg ▴ 270
6
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15
replies
3.1k
views
Change in pathway IDs scheme in reactome.db
reactome.db fgsea
updated 7.3 years ago by ▴ 150 • written 7.3 years ago by ▴ 270
0
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1
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2.2k
views
Comment: C: Statistic for GSA
7.5 years ago alserg ▴ 270
2
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0
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1.6k
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Answer: A: Direction aware fgsea test
7.5 years ago alserg ▴ 270
0
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0
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2.4k
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Comment: C: Chipseeker is unavabile on Linux CentOS7 ?
7.7 years ago alserg ▴ 270
0
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1
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2.4k
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Comment: C: Chipseeker is unavabile on Linux CentOS7 ?
7.7 years ago alserg ▴ 270
4
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0
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13k
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Answer: A: pre-ranked GSEA within R?
7.9 years ago alserg ▴ 270
0
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0
replies
13k
views
Comment: C: pre-ranked GSEA within R?
7.9 years ago alserg ▴ 270
0
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0
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13k
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Comment: C: pre-ranked GSEA within R?
8.3 years ago alserg ▴ 270
0
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2
replies
13k
views
Comment: C: pre-ranked GSEA within R?
8.4 years ago alserg ▴ 270
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