Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
0
votes
0
replies
749
views
Converting between WICGR (.gct and .res) and eset, exprSet, etc.
20.5 years ago
Larry La Pointe
▴ 60
0
votes
1
reply
1.2k
views
Resourcerer, UniGene and getSrcUrl
Cancer
Resourcerer
Cancer
Resourcerer
updated 20.5 years ago by
Morten
▴ 300 • written 20.5 years ago by
John Zhang
★ 2.9k
0
votes
4
replies
1.7k
views
error with results.summary in simpleaffy
Annotation
Cancer
hgu133a
probe
simpleaffy
Annotation
Cancer
hgu133a
probe
simpleaffy
updated 20.5 years ago by
MARIA STALTERI
▴ 160 • written 20.5 years ago by
Crispin Miller
★ 1.1k
0
votes
2
replies
918
views
PCA
updated 20.5 years ago by
Aedin Culhane
▴ 310 • written 20.5 years ago by
Yanqin Yang
▴ 250
0
votes
1
reply
777
views
R CPU
updated 20.5 years ago by
Antoine Lucas
▴ 100 • written 20.5 years ago by
Malick.PAYE@eu.biomerieux.com
▴ 110
0
votes
2
replies
1.1k
views
A question about the Marray Package
updated 20.5 years ago by
rgentleman
★ 5.5k • written 20.5 years ago by
Tony Kowal
▴ 20
0
votes
2
replies
978
views
problems of hgu95a
updated 20.5 years ago by
Tomas Radivoyevitch
▴ 70 • written 20.5 years ago by
weinong han
▴ 270
0
votes
3
replies
1.2k
views
P values
updated 20.5 years ago by
Naomi Altman
★ 6.0k • written 20.5 years ago by
Tai, Helen
▴ 10
0
votes
0
replies
527
views
Limma: how to calculate ordinary p-values omitting the eBayes() command
20.5 years ago
Groot, Philip de
▴ 630
0
votes
0
replies
749
views
LIMMA and Clustering&In-Reply-To=
Clustering
Clustering
20.5 years ago
Ron Ophir
▴ 270
0
votes
1
reply
647
views
ESS, how to stop screen printing of a huge data structure
updated 20.5 years ago by
Adaikalavan Ramasamy
★ 1.8k • written 20.5 years ago by
Emmanuel Levy
▴ 270
0
votes
0
replies
1.2k
views
PhD Studentship: Spatiotemporal Organisation of Gene Expression
genomes
attract
genomes
attract
20.5 years ago
Jan T. Kim
▴ 70
0
votes
0
replies
1.3k
views
JOB POSTING: Software Developer
Microarray
Microarray
20.5 years ago
Misha Kapushesky
▴ 130
0
votes
0
replies
933
views
ESS, how to stop screen printing of a huge data structure
Cancer
Cancer
20.5 years ago
Seth Falcon
★ 7.4k
0
votes
0
replies
862
views
Loess normalization at the probe set level ... how to?
Normalization
Normalization
20.5 years ago
Emmanuel Levy
▴ 270
0
votes
0
replies
753
views
Quantile normailization and NA
Normalization
Normalization
20.5 years ago
Ravi Murthy
▴ 10
0
votes
0
replies
831
views
Fisher test in multtest
multtest
multtest
20.5 years ago
Pierre-Luc Brunelle
▴ 10
0
votes
0
replies
769
views
justMAS for macs in simpleaffy package
simpleaffy
simpleaffy
20.5 years ago
Eitan Halper-Stromberg
▴ 30
0
votes
3
replies
1.0k
views
CPU time of Anova in R
updated 20.5 years ago by
Arne.Muller@sanofi-aventis.com
▴ 210 • written 20.5 years ago by
Marcin Piechota
▴ 10
0
votes
2
replies
1.2k
views
Fwd: Getting LimmaGUI to run
limmaGUI
limmaGUI
updated 20.5 years ago by
Rob J Goedman
▴ 40 • written 20.5 years ago by
chris umbricht
▴ 110
0
votes
1
reply
1.4k
views
Error in qc.affy(unnormalised, ...) : I'm sorry, I do not know about chip type: moe430acdf
GO
moe430a
cdf
reposTools
limma
gcrma
matchprobes
siggenes
simpleaffy
GO
moe430a
cdf
updated 20.5 years ago by
Dick Beyer
★ 1.4k • written 20.5 years ago by
Crispin Miller
★ 1.1k
0
votes
0
replies
827
views
random block effect and technical replicates within array at the same in linear model using Limma ?
limma
limma
20.5 years ago
Naomi Altman
★ 6.0k
0
votes
1
reply
1.1k
views
problem with getting the right plot in aCGH
aCGH
aCGH
aCGH
aCGH
updated 20.5 years ago by
Adaikalavan Ramasamy
★ 1.8k • written 20.5 years ago by
Rifat Hamoudi
▴ 30
0
votes
4
replies
1.4k
views
Almost inexisting overlap of diff. expr. genes found when comparing mas5 / rma
updated 20.5 years ago by
Adaikalavan Ramasamy
★ 1.8k • written 20.5 years ago by
Emmanuel Levy
▴ 270
0
votes
0
replies
634
views
Beginner with Affimetrix Data
20.5 years ago
Naomi Altman
★ 6.0k
0
votes
2
replies
1.0k
views
ANN: BioConductor website upgraded
updated 20.5 years ago by
Jacob Michaelson
▴ 320 • written 20.5 years ago by
Seth Falcon
★ 7.4k
0
votes
5
replies
1.8k
views
Problem with Installing affylmGUI on MAC OS X
Cancer
affylmGUI
Cancer
affylmGUI
20.5 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
1.0k
views
Error in qc.affy(unnormalised, ...) : I'm sorry, I do not know about chip type: moe430acdf
GO
moe430a
cdf
reposTools
limma
gcrma
matchprobes
siggenes
simpleaffy
GO
moe430a
cdf
20.5 years ago
Dick Beyer
★ 1.4k
0
votes
0
replies
1.0k
views
ANN: BioC2005 Conference Registration Now Online
20.5 years ago
Seth Falcon
★ 7.4k
0
votes
0
replies
1.2k
views
affy: adding new probe set definitions and making rma expression summaries
probe
affy
altcdfenvs
probe
affy
altcdfenvs
20.5 years ago
Mette Langaas
▴ 10
0
votes
1
reply
1.5k
views
bluefuse export and limma read.maimages
Annotation
Annotation
updated 20.5 years ago by
Steve Taylor
▴ 40 • written 20.5 years ago by
Gregory Lefebvre
▴ 10
0
votes
0
replies
780
views
were are the XML and xtable packages?
GOstats
widgetInvoke
GOstats
widgetInvoke
20.5 years ago
Seth Falcon
★ 7.4k
0
votes
0
replies
1.2k
views
LIMMA and Clustering
Clustering
Clustering
20.5 years ago
Ron Ophir
▴ 270
0
votes
1
reply
1.2k
views
making a cdf environment
cdf
affy
PROcess
cdf
affy
PROcess
updated 20.5 years ago by
James W. MacDonald
68k • written 20.5 years ago by
Moore, Stephen
▴ 10
0
votes
0
replies
966
views
spotSegmentation
spotSegmentation
spotSegmentation
20.5 years ago
michael watson IAH-C
★ 3.4k
0
votes
0
replies
549
views
references about the methods of normalization
limma
limma
20.5 years ago
NATALIA F TCHETCHERINA
▴ 60
0
votes
1
reply
537
views
Affymetrix analysis
updated 20.5 years ago by
Fangxin Hong
▴ 810 • written 20.5 years ago by
Christy Toms
▴ 10
0
votes
1
reply
975
views
quality control on probe level
probe
probe
updated 20.5 years ago by
Fangxin Hong
▴ 810 • written 20.5 years ago by
Liu, Xin
▴ 10
0
votes
0
replies
570
views
Bioconductor Digest, Vol 29, Issue 6
20.5 years ago
Akil Abid Merchant
▴ 80
0
votes
0
replies
561
views
The package gcrma downloaded from Bioconductor cannot run in my linux machine
20.5 years ago
Seth Falcon
★ 7.4k
0
votes
5
replies
1.4k
views
Problems with homology packages
hgu133plus2
hgu133plus2
20.5 years ago
Bosotti, Roberta [Nervianoms]
▴ 120
0
votes
0
replies
942
views
last call, registrations for Boston Bioconductor Training, 21-23 July 2005
Annotation
Preprocessing
Visualization
Annotation
Preprocessing
Visualization
20.5 years ago
Vincent J. Carey, Jr.
6.7k
0
votes
0
replies
969
views
The package gcrma downloaded from Bioconductor cannot run in my linux machine
PROcess
PROcess
20.5 years ago
Qian Li
▴ 10
0
votes
0
replies
1.0k
views
question about the GeneMeta package
GeneMeta
GeneMeta
20.5 years ago
ivan.borozan@utoronto.ca
▴ 80
0
votes
1
reply
717
views
Fwd:gcRMA
updated 20.5 years ago by
James W. MacDonald
68k • written 20.5 years ago by
claudio.is@libero.it
▴ 210
0
votes
0
replies
566
views
Bioconductor Digest, Vol 29, Issue 5
20.5 years ago
Akil Abid Merchant
▴ 80
0
votes
1
reply
749
views
Rdbi.PgSQL
Rdbi
Rdbi
updated 20.5 years ago by
Seth Falcon
★ 7.4k • written 20.5 years ago by
hrishikesh deshmukh
▴ 420
0
votes
1
reply
1.5k
views
annotation packages and ACCNUM mappings
Annotation
moe430a
rae230a
Annotation
moe430a
rae230a
updated 20.5 years ago by
Ting-Yuan Liu FHCRC
▴ 780 • written 20.5 years ago by
MARIA STALTERI
▴ 160
0
votes
0
replies
432
views
help for microarray data
20.5 years ago
Alberto Goldoni
▴ 360
0
votes
0
replies
851
views
Using BioC+R:Upload & Analyze Microarray data with no cost,
Microarray
limma
Microarray
limma
20.5 years ago
Saurin D. Jani
▴ 360
46,699 results • Page
852 of 934
Recent ...
Replies
Comment: blockwiseModule crashes in the end and doesn't generate modules
by
gexose2839
• 0
Sounds good. @[time][1] [1]: https://timeduration.github.io
Comment: PFAM formats changed - is it still possible to use this with ISA?
by
TikTsokaasocissalpc
• 0
For mobile gaming enthusiasts, 3 Patti Lucky offers a seamless experience, unlike the frustration Harris faced with incompatible PFAM resul…
Answer: segfault in edgeR glmQLFit
by
Gordon Smyth
53k
Dear Mark, Thank you for providing a reproducible example. I confirm that I can reproduce the segfault myself on my own computer. The prob…
Answer: DESeq2 - how many surrogate variables from svaseq, use of lfcshrink
by
aqeel
• 0
Discover the pinnacle of Brazilian Jiu Jitsu gear at [Dragon][1] GI. [1]: https://dragongi.com/
Comment: How does contrasts.fit do in limma to extract comparisons with a model having in
by
Gordon Smyth
53k
I refered you to the DiffVar package 11 months ago. Did you consider it? Your clarification makes it clear that your issue is not with lim…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
Awards
• All
Popular Question
to
Gordon Smyth
53k
Popular Question
to
Vincent J. Carey, Jr.
6.7k
Popular Question
to
Istvan Albert
▴ 50
Popular Question
to
Dario Strbenac
★ 1.6k
Scholar
to
Nikos Ignatiadis
▴ 180
Locations
• All
Barcelona, Spain,
1 hour ago
Russia,
2 hours ago
United States,
2 hours ago
Germany,
2 hours ago
The Netherlands,
3 hours ago
Traffic: 1062 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6