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1
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1.3k
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help with paired-test in limma
limma limma
updated 20.5 years ago by ▴ 360 • written 20.5 years ago by ▴ 380
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2
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1.1k
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Using BioC+R, UPLOAD and ANALYZE your data with no cost,
Microarray limma Microarray limma
updated 20.5 years ago by ★ 5.5k • written 20.5 years ago by ▴ 360
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1
reply
906
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duplicateCorrelation and design matrix
limma limma
updated 20.5 years ago by ▴ 60 • written 20.5 years ago by 53k
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1
reply
648
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switch menu
updated 20.5 years ago by ★ 7.4k • written 20.5 years ago by ▴ 130
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0
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921
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Calculating variance across probes
Normalization Normalization
20.5 years ago Dax42@web.de ▴ 10
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1
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673
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read.affy missing row labels
probe probe
updated 20.5 years ago by 68k • written 20.5 years ago by ▴ 50
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1
reply
1.1k
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common genes between hgu133a and hu6800
Microarray hgu133a hu6800 Microarray hgu133a hu6800
updated 20.5 years ago by ▴ 420 • written 20.5 years ago by ▴ 360
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2
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867
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C. elegans annotation package
updated 20.5 years ago by 68k • written 20.5 years ago by ▴ 270
0
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0
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564
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Bioconductor Digest, Vol 29, Issue 3
20.5 years ago Akil Abid Merchant ▴ 80
0
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0
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1.2k
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Agilent Arrays
affy oligo BEAT affy oligo BEAT
20.5 years ago Naomi Altman ★ 6.0k
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1
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1.1k
views
duplicateCorrelation and design matrix
limma limma
updated 20.5 years ago by ▴ 60 • written 20.5 years ago by 53k
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3
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1.3k
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swaping values in a RGList object...
limma limma
updated 20.5 years ago by ▴ 680 • written 20.5 years ago by ▴ 140
0
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0
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904
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limma: decideTests, which option to chose?
limma limma
20.5 years ago Gordon Smyth 53k
0
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0
replies
845
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simpleaffy qc probes ratio
cdf graph simpleaffy cdf graph simpleaffy
20.5 years ago Paul.Delmar@serono.com ▴ 10
0
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0
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941
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RMA for bad chips
Microarray Normalization affyPLM Microarray Normalization affyPLM
20.5 years ago James W. MacDonald 68k
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0
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How to use distance functions from hopach package in a heatmap?
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20.5 years ago kpollard ▴ 110
0
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0
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1.1k
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duplicateCorrelation and design matrix
limma limma
20.5 years ago Carolyn Fitzsimmons ▴ 60
0
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0
replies
864
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A general data analysis question
20.5 years ago Khan, Sohail ▴ 490
0
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4
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1.7k
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biomaRt package listMarts() error
biomaRt biomaRt
20.5 years ago Ye, Bin ▴ 150
0
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1
reply
686
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cross experiments or geo series normalization
Normalization Normalization
updated 20.5 years ago by ★ 5.5k • written 20.5 years ago by ▴ 10
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2
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858
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(no subject)
Microarray probe Microarray probe
updated 20.5 years ago by ▴ 460 • written 20.5 years ago by ▴ 10
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2
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readGPR (arrayQuality)
Microarray Microarray
updated 20.5 years ago by 53k • written 20.5 years ago by ▴ 10
0
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10
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3.8k
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read.GenePix not opening connection
Microarray marray Microarray marray
updated 20.5 years ago by ▴ 20 • written 20.5 years ago by ▴ 460
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0
replies
1.6k
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spike control normalization
Normalization limma Normalization limma
20.5 years ago Gordon Smyth 53k
0
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0
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1.6k
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CyberT: Paired Bayes t-test (Bayes corrected p-values)
Normalization Bayesian Normalization Bayesian
20.5 years ago Gordon Smyth 53k
0
votes
1
reply
1.1k
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affycomp hgu133 assessment error
hgu133a hgu95a affycomp hgu133a hgu95a affycomp
20.5 years ago Ariel Chernomoretz ▴ 380
0
votes
6
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2.1k
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Many missing GO terms from GOHyperG call using mgu74av2
GO Survival hgu95av2 mgu74av2 Ruuid annotate multtest affy graph annaffy RBGL GOstats
updated 20.5 years ago by ★ 7.4k • written 20.5 years ago by ★ 1.4k
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0
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353
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RMA for bad chips
20.5 years ago Jai Prakash Mehta ▴ 10
0
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0
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981
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limma: decideTests, which option to chose?
20.5 years ago kerick@molgen.mpg.de ▴ 10
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0
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custom Methods for summary expression value - SOLVED
20.5 years ago stecalza@tiscali.it ▴ 290
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0
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custom Methods for summary expression value
20.5 years ago stecalza@tiscali.it ▴ 290
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0
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1.1k
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staff/postdoc position in signal processing
20.5 years ago Simon Lin ▴ 210
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0
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655
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Saturation in Affy chips
probe probe
20.5 years ago McGee, Monnie ▴ 300
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0
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928
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spike control normalization
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20.5 years ago NATALIA F TCHETCHERINA ▴ 60
0
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1
reply
944
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justMAS reliability
hgu133a cdf hgu133a cdf
updated 20.5 years ago by ★ 1.1k • written 20.5 years ago by ▴ 30
0
votes
0
replies
733
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CyberT: Paired Bayes t-test (Bayes corrected p-values)
20.5 years ago Groot, Philip de ▴ 630
0
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2
replies
1.0k
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annotate, htmlpage and othernames
probe annotate probe annotate
updated 20.5 years ago by 68k • written 20.5 years ago by ▴ 300
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2
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1.2k
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error with results.summary in simpleaffy
Cancer hgu133a probe Cancer hgu133a probe
20.5 years ago Jack Zhu ▴ 30
0
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0
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1.1k
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readGPR (arrayQuality)
Microarray Microarray
20.5 years ago Paquet, Agnes ▴ 500
0
votes
5
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996
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error message with GCRMA
updated 20.5 years ago by 68k • written 20.5 years ago by ★ 2.0k
0
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1
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894
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source URL changed for AnnBuilder?
GO GO
updated 20.5 years ago by ★ 2.9k • written 20.5 years ago by ▴ 10
0
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1
reply
1.4k
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justMAS and mas5
hgu133a cdf simpleaffy hgu133a cdf simpleaffy
updated 20.5 years ago by ★ 1.1k • written 20.5 years ago by ▴ 30
0
votes
7
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2.1k
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Agilent Arrays
affy limma marray affy limma marray
updated 20.5 years ago by ▴ 30 • written 20.5 years ago by ▴ 340
0
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3
replies
1.1k
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Beginner with Affimetrix Data
updated 20.5 years ago by ★ 7.4k • written 20.5 years ago by ▴ 20
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2
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1.9k
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chromosome position --> gene
updated 20.5 years ago by 21k • written 20.5 years ago by ▴ 30
0
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0
replies
919
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How to determine genes' presence
Microarray probe Microarray probe
20.5 years ago Wuming Gong ▴ 40
0
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0
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Agilent Arrays
affy limma marray affy limma marray
20.5 years ago Gordon Smyth 53k
0
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0
replies
1.3k
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differences or 1-channel (was Re: Agilent Arrays)
Normalization GO probe affy affydata vsn limma marray BEAT Normalization GO probe affy
20.5 years ago Naomi Altman ★ 6.0k
0
votes
1
reply
874
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wrong format in GOTERM
Annotation GO Annotation GO
updated 20.5 years ago by ★ 7.4k • written 20.5 years ago by ▴ 810
0
votes
1
reply
1.1k
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error msg w/ read.marrayRaw() : "targets" matched by multiple actual arguments
marray marray
updated 20.5 years ago by ▴ 730 • written 20.5 years ago by ▴ 250
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