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Created A Post With More Than 5 Votes
Awarded 394 times (see all awards). Earned by the
following contributors:
3 years, 6 months ago
The city by the bay
A: Adjust for multiple batches using combat
3 years, 6 months ago
The city by the bay
A: LogFC: how do you determine the cutoff for differentially expressed genes?
3 years, 6 months ago
The city by the bay
A: Allele Specific Expression in DESeq2 or EdgeR
3 years, 6 months ago
The city by the bay
A: Downstream analysis after using mnnCorrect()
3 years, 6 months ago
United States
A: Error in GRanges: could not find symbol "recursive" in environment of the generi
3 years, 6 months ago
United States
A: Combining RangedData objects is broken (IRanges 2.8.1 with R version 3.3.3 RC)
3 years, 6 months ago
United States
A: How to convert a GRangesList object into a GRanges object?
3 years, 6 months ago
United States
A: Best way to convert uniprot accessions to entrez gene identifiers in R
3 years, 6 months ago
United States
A: Effect of lfcThreshold on p-value in DESeq2
3 years, 6 months ago
United States
A: DeSeq2 results converting ENSG IDs to Gene Symbols, more than one ENSG ID per Ge
3 years, 6 months ago
United States
A: How to deal with Affymetrix GeneChip probeids that map to multiple genes
3 years, 6 months ago
United States
A: featureCount - very less Successfully assigned reads
3 years, 6 months ago
United States
A: Best method/package for Gene Set Enrichment Analysis in microarrays?
3 years, 6 months ago
United States
A: Error: This function only works when used with the ensembl BioMart.
3 years, 6 months ago
United States
A: Limma - discrepancy in number of significant genes
3 years, 6 months ago
United States
A: Extract sequence from DNAStringSet object
4 years, 9 months ago
United States
Effect of lfcThreshold on p-value in DESeq2
4 years, 9 months ago
United States
DESeq2 testing ratio of ratios (RIP-Seq, CLIP-Seq, ribosomal profiling)
4 years, 11 months ago
United States
conceptual question about FDR, FDR adjusted p-value and q-value
5 years, 3 months ago
United States
Effect of lfcThreshold on p-value in DESeq2
5 years, 3 months ago
United States
DeSeq2 results converting ENSG IDs to Gene Symbols, more than one ENSG ID per Gene symbol
5 years, 3 months ago
United States
DESeq2 testing ratio of ratios (RIP-Seq, CLIP-Seq, ribosomal profiling)
5 years, 3 months ago
United States
Updated DESeq2 performance on highly replicated yeast RNA-seq data
5 years, 3 months ago
United States
Statistics and Computing in Genome Science (CSAMA) Course Material
5 years, 3 months ago
United States
Updated DESeq2 performance on highly replicated yeast RNA-seq data
5 years, 3 months ago
EMBL Heidelberg
Error: Bioconductor version '3.8' requires R version '3.5'
5 years, 3 months ago
WEHI, Melbourne, Australia
simultaneous use of robust and weighting methods in limma
5 years, 3 months ago
WEHI, Melbourne, Australia
Removing continuous covariate effects in limma analysis
5 years, 3 months ago
WEHI, Melbourne, Australia
How barcode-plot enrichment is calculated?
5 years, 3 months ago
WEHI, Melbourne, Australia
Volcanoplot with limma - RAW P-values or Adj.P-Values
5 years, 3 months ago
The city by the bay
edgeR normalisation factors different between experimental groups
5 years, 3 months ago
The city by the bay
differential expression analysis of htseq data with edgeR/voom
5 years, 3 months ago
The city by the bay
Representative gene expression value in one condition with several replicates
5 years, 3 months ago
EMBL European Molecular Biology Laborat…
Course announcement: Statistical Data Analysis for Genome Scale Biology (CSAMA) - Brixen, Italy 21-26 July 2019
5 years, 3 months ago
United States
Invitation to submit articles to the Bioconductor gateway on F1000Research
5 years, 3 months ago
United States
How to use GenomicRanges to find overlaps by percentage covered of interval
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