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Awarded 246 times (see all awards). Earned by the following contributors:
David R ▴ 90
6 years, 5 months ago
European Union
DESeq2: NA on padj column when doing bonferroni
Amit Indap ▴ 10
6 years, 5 months ago
United States
Understanding Contrasts when analyzing DESeq2 results
jarod_v6@libero.it ▴ 40
6 years, 5 months ago
Italy
Deseq2 PCA plot customize
Michael Love 43k
6 years, 6 months ago
United States
New function lfcShrink() in DESeq2
raya.fai ▴ 60
6 years, 6 months ago
Israel
Dealing with genes that have Padj=NA
enricoferrero ▴ 660
6 years, 6 months ago
Switzerland
[GenomicRanges] subsetByOverlaps to keep info from both GRanges objects?
chang02_23 ▴ 30
6 years, 6 months ago
United States
biomartRt: convert mouse gene symbol return multiple human gene symbol
jacorvar ▴ 40
6 years, 6 months ago
European Union
How to get rid of "Update all/some/none? [a/s/n]:"
Jurat Shahidin ▴ 80
6 years, 6 months ago
Chicago, IL, USA
Any quick solution for fixing error : "$ operator is invalid for atomic vectors" ?
Jurat Shahidin ▴ 80
6 years, 6 months ago
Chicago, IL, USA
Couldn't install GenomicRanges packages after update bioconductor to 3.2 version ?
TriS ▴ 200
6 years, 7 months ago
United States
RDAVIDWebService - Unable to sendViaPost to url etc etc - server time out
ribioinfo ▴ 100
6 years, 9 months ago
edgeR TMM values
Tiphaine Martin ▴ 40
6 years, 9 months ago
France
install new package from bioconductor
ruppmz • 0
6 years, 9 months ago
Installation Problem: installation path not writeable, unable to update packages: MASS, mgcv, rpart
prp291 • 0
6 years, 10 months ago
Deseq2 for RNAseq experiments without replicates
nickflowcyto ▴ 50
7 years ago
Error: package or namespace load failed for...
John Blischak ▴ 190
7 years ago
using duplicateCorrelation with limma+voom for RNA-seq data
Casper van Mourik • 0
7 years, 1 month ago
Finland
unable to find an inherited method for function counts for signature DESeqTransform
kyliecode • 0
7 years, 1 month ago
Sweden
Warning in "countReads" [Warning message: In .Seqinfo.mergexy(x, y) : The 2 combined objects have no sequence levels in common.]
dsperley • 0
7 years, 1 month ago
United States
P Value of 0?
alexvpickering ▴ 110
7 years, 2 months ago
Canada
[SOLVED] BUG REPORT: Ubuntu 14.04 xps Installation libcrypto.so.10
keerthisannareddy • 0
7 years, 3 months ago
log2FoldChange calculation in DESeq2 output
cahidora ▴ 100
7 years, 3 months ago
Differential expression analysis starting from TPM data
Deepak Tanwar ▴ 10
7 years, 3 months ago
McGill University, Canada
Heatmap Plotting in R
cms72 ▴ 20
7 years, 4 months ago
LogFC: how do you determine the cutoff for differentially expressed genes?
greg.mulhearn • 0
7 years, 4 months ago
Australia
Error with "library("GenomicFeatures")" - "there is no package called ‘XML’"
Gordon Smyth 52k
7 years, 5 months ago
WEHI, Melbourne, Australia
limma moderated t-statistics and B-statistics
Pankaj Agarwal ▴ 100
7 years, 5 months ago
United States
DESeq2: Paired Test
svlachavas ▴ 840
7 years, 5 months ago
Germany/Heidelberg/German Cancer Resear…
Correct construction of design matrix in limma for multiple contrasts for gene expression profiling
svlachavas ▴ 840
7 years, 5 months ago
Germany/Heidelberg/German Cancer Resear…
"Error in readRDS(file) : unknown input format" appearing every time starting Rstudio after BiocUpgrade
Stephen Turner ▴ 290
7 years, 5 months ago
United States
DESeq2 vs limma/voom: PCA completely different. How to proceed?
Jenny Drnevich ★ 2.0k
7 years, 5 months ago
United States
biocLite() fails to update packages when main library not writable
Biologist ▴ 120
7 years, 5 months ago
Heatmap with error message: `x' must be a numeric matrix
ribioinfo ▴ 100
7 years, 5 months ago
edgeR TMM values
ribioinfo ▴ 100
7 years, 5 months ago
DESeq2 FPKM normalization
seeker • 0
7 years, 6 months ago
Netherlands
DESeq2 installation error
Johannes Rainer ★ 2.1k
7 years, 6 months ago
Italy
Problem with biomart's listMarts function
aristotele_m ▴ 40
7 years, 6 months ago
Italy
Deseq2 supervised heatmap
aristotele_m ▴ 40
7 years, 6 months ago
Italy
deseq2 filter the low counts
tangming2005 ▴ 200
7 years, 6 months ago
United States
DESeq2 for ChIP-seq differential peaks
enricoferrero ▴ 660
7 years, 6 months ago
Switzerland
How to properly sort GRanges?
enricoferrero ▴ 660
7 years, 6 months ago
Switzerland
[GenomicRanges] subsetByOverlaps to keep info from both GRanges objects?
shao ▴ 100
7 years, 7 months ago
Germany
DEseq2 time-series design.
hughes.drew ▴ 100
7 years, 7 months ago
United States
DEseq2 extended to open chromatin anlaysis: normalization, dispersion fit, and "too many" differences
amoltej ▴ 10
7 years, 7 months ago
Australia
featureCount - very less Successfully assigned reads
erin.gill81 ▴ 60
7 years, 7 months ago
Canada
3D PCA Plot of RNA-seq Data using plotPCA from within DESeq2
arfranco ▴ 130
7 years, 8 months ago
European Union
limma p-value and adjusted p-value meaning
AB ▴ 110
7 years, 8 months ago
United States
Batch correction in DESeq2
Jon Bråte ▴ 260
7 years, 8 months ago
Norway
Differential expression of FPKM from RNA-seq data using limma and voom()
kjclowers • 0
7 years, 8 months ago
United States
EdgeR Design matrix not of full rank
246 results • Page 2 of 5
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