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Awarded 246 times (see all awards). Earned by the following contributors:
komal.rathi ▴ 120
7 years, 1 month ago
United States
Extract sequence from DNAStringSet object
deena ▴ 20
7 years, 1 month ago
Germany
logfoldStandard Error and wald-statistics in DESeq2 results
mat.lesche ▴ 90
7 years, 1 month ago
Germany
DESeq2: multiple factors and comparison of a main factor between samples
mat.lesche ▴ 90
7 years, 1 month ago
Germany
DESeq2: with multiple factors and interaction terms won't show all effects
g.atla ▴ 10
7 years, 2 months ago
DESeq2 PCA plot: paired analysis
Darya Vanichkina ▴ 120
7 years, 2 months ago
Australia/Centenary Institute Universit…
DESeq2: add annotations (from data frame) to DESeqDataSet
Catalina Aguilar Hurtado ▴ 90
7 years, 2 months ago
United States
Report and compare log2FC vs FC
NS ▴ 60
7 years, 2 months ago
United States
Mapping genome regions to gene symbols
Gordon Smyth 50k
7 years, 2 months ago
WEHI, Melbourne, Australia
EdgeR LogCpm and LogFC values calculation
Rémi Willamme ▴ 10
7 years, 3 months ago
University of Liege, Belgium
Installation of package DESeq2
tombernardryan ▴ 50
7 years, 3 months ago
DESeq2: Is it possible to convert read counts to expression values via TPM and return these values?
al-ash ▴ 50
7 years, 3 months ago
plotPCA - how to add labels to a PCA plot
Vivek.b ▴ 100
7 years, 3 months ago
Germany
RDAVIDWebService Error 301: Moved Permanently
Neel Aluru ▴ 460
7 years, 4 months ago
United States
heatmap.2 Z-score vs logFC
tonja.r ▴ 80
7 years, 5 months ago
United Kingdom
FDR and padj in deseq and edger
tonja.r ▴ 80
7 years, 5 months ago
United Kingdom
gene dispersion, what does it mean?
ew17 • 0
7 years, 6 months ago
dmrcate(): Error in `$<-.data.frame`(`*tmp*`, "sig", value = logical(0)) : replacement has 0 rows, data has 1963
mbeckste ▴ 30
7 years, 6 months ago
Usability of ERCC spike-ins in standard RNAseq experiments
Matthew Thornton ▴ 350
7 years, 6 months ago
USA, Los Angeles, USC
Limma design and contrast matrix question.
John ▴ 30
7 years, 6 months ago
Converting first column to rownames
thekatybrown ▴ 10
7 years, 7 months ago
Error: Faceting variables must have at least one value when plotting with ChIPQC
sjmonkley ▴ 40
7 years, 8 months ago
Sweden
Can't load package "org.Hs.eg.db"
nafeesa ▴ 10
7 years, 8 months ago
Germany
DESeq2 timecourse - How to set the experimental design
Merienne Nicolas ▴ 120
7 years, 8 months ago
Switzerland
Packages for GO and KEGG analysis on RNAseq data
Nikul Soni ▴ 80
8 years, 2 months ago
Sweden
convert data in to expression set
lassancejm ▴ 50
8 years, 2 months ago
when to apply quantile normalization with voom in limma/voom framework with RNA-seq data?
Pablo marin-garcia ▴ 90
8 years, 2 months ago
United Kingdom
how to use biomaRt with ensembl build 37
Bstn132 • 0
8 years, 3 months ago
Boston
DEseq2 - Use normalized DEseq2 counts to plot most expressed genes per group
Vani ▴ 20
8 years, 3 months ago
United States
Creating an Expression Set with a csv file
khauser130d ▴ 50
8 years, 4 months ago
United Kingdom
How to use GenomicRanges to find overlaps by percentage covered of interval
luigi.cerulo ▴ 40
8 years, 4 months ago
European Union
makeTxDbFromBiomart Error: 1: Space required after the Public Identifier
louiseapps2 • 0
8 years, 4 months ago
United Kingdom
Installing Bioclite.R Package
zpingfeng • 0
8 years, 5 months ago
Australia
DESeq2 baseMean counts
michel.renou • 0
8 years, 5 months ago
France/Versailles/INRA
Unable to connect from R 3.2.2
frostbite907 • 0
8 years, 5 months ago
Issues connecting with R 3.2.2 to source("http://bioconductor.org/biocLite.R")
nickbern92 • 0
8 years, 6 months ago
United States
Normalization of RNA-seq data: between samples and within samples
moanam • 0
8 years, 6 months ago
New Zealand
Error in file(con, “r”) : cannot open the connection
Pauly Lin ▴ 150
8 years, 6 months ago
University of New South Wales, Australia
RPKM, CPM and TMM
Pauly Lin ▴ 150
8 years, 6 months ago
University of New South Wales, Australia
RPKM, CPM and TMM
jjinhyoungkim ▴ 20
8 years, 7 months ago
Canada
Group comparison in DESeq2
jjinhyoungkim ▴ 20
8 years, 7 months ago
Canada
DESeq2: Starting from count tables
hao.lin ▴ 20
8 years, 7 months ago
"rstudio initialization error: unable to connect to service" after logging in to the Master node's Rstudio Server's login page
tj.hu ▴ 10
8 years, 7 months ago
United States
How do I extract the principal components in DESeq2?
xyliu00 ▴ 20
8 years, 8 months ago
United States
How to make contrast table to combine two conditions/treatments against another one (in a multi groups experiments
kmu004 ▴ 50
8 years, 8 months ago
United States
DESEq2 comparison with mulitple cell types under 2 conditions
brohawndg ▴ 150
8 years, 8 months ago
United States
WGCNA for RNA-Seq Sample Set, Outliers, and Spearman correlation
anikumar.murugan • 0
8 years, 8 months ago
United States
BiocInstaller’ is not available (for R version 3.2.2)
J.delasHeras@ed.ac.uk ★ 1.9k
8 years, 8 months ago
United Kingdom
GEOquery: how to extract experimental data? (confused)
Makis Motakis ▴ 30
8 years, 8 months ago
Japan
edgeR rpkm function
nickp60 • 0
8 years, 9 months ago
United States
Extracting custom post-normalization counts from DESeq2
246 results • Page 3 of 5
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