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Created An Answer With At Least 3 Up-Votes
Awarded 2247 times (see all awards). Earned by the
following contributors:
1 year, 10 months ago
United States
Answer: Flank GenomicRanges on Both Sides
1 year, 11 months ago
WEHI, Melbourne, Australia
Answer: How to identify top most variable genes from log2 normalized data?
1 year, 11 months ago
United States
Answer: Find ranges that are shared by 80% or more of 10 GRanges objects
1 year, 11 months ago
St Louis, MO
Answer: Implementation of the "original" GSEA algorithm in R
2 years ago
United States
Answer: Too many differentially expressed miRNA with limma
2 years, 1 month ago
United States
Answer: Problem obtaining NCBI gene IDs from Ensembl version 107
2 years, 1 month ago
Heidelberg
Answer: Is there any description available for KEGG Pathway Edge Types
2 years, 2 months ago
United States
Answer: karyoploteR genome coverage plotting using BSgenome.TAIR10
2 years, 3 months ago
United States
Answer: Convert an R data.frame to a bed file in R
2 years, 4 months ago
Australia/Melbourne/Olivia Newton-John …
Answer: cellCounts() function floating point error
2 years, 4 months ago
France
Answer: DESeq2 is renaming gene names and lack of downregulated genes
2 years, 5 months ago
United States
Answer: Confused about the CPM and TMM normalization in edgeR
2 years, 5 months ago
United States
Answer: Large difference between lfcshrink and non-shrunk DESeq2 results
2 years, 6 months ago
WEHI, Melbourne, Australia
Answer: Pseudo-bulk Limma Approaches
2 years, 6 months ago
United States
Answer: how to color specific node or gene symbol from cnetplot ?
2 years, 7 months ago
United States
Answer: Normalization of IDAT files from Illumina HumanMethylation450 BeadChip without .
2 years, 7 months ago
United States
Answer: confused with tximport counts abundance using salmon input
2 years, 8 months ago
Miami, US
Answer: GDCprepare of RNAseq counts produces error
2 years, 8 months ago
WEHI, Melbourne, Australia
Answer: GSEA many significant gene sets despite no differentially expressed genes
2 years, 8 months ago
United States
Answer: Why does BSgenome contain more chromosomes of human and mouse species then they
2 years, 8 months ago
United States
Answer: GO term gene ontology enrichment analysis
2 years, 9 months ago
United States
Answer: Replicating iDEP parameters in DESeq2; two conditions and an interaction term.
2 years, 9 months ago
United States
Answer: Updating org.Sc.sgd.db, and integration with topGO
2 years, 10 months ago
United States
Answer: Limma/voom analysis of time-series data (with only 1 condition)
2 years, 10 months ago
United States
Answer: Although I successfully installed the package "simpleaffy'' , I cannot library i
2 years, 10 months ago
United States
Answer: Start to End RNA-Seq with R Bioconductor
2 years, 10 months ago
Seattle, WA, United States
Answer: Why is "SimpleList" not inheriting "list" ?
2 years, 11 months ago
United States
Answer: P-values change 100-fold with only a single count changed
2 years, 11 months ago
Seattle, WA, United States
Answer: Splitting a TxDB or GRanges by Chromosome
2 years, 11 months ago
EMBL Heidelberg
Answer: Install package without updating dependent package
2 years, 12 months ago
Seattle, WA, United States
Answer: Please allow integers in `numeric` format in `seqlengths`
3 years ago
Austria
Answer: XVector installation fails because zlib.h is not found
3 years ago
United States
Answer: Coding Style for BioC Package submissions: camelCaps or snake_case?
3 years ago
WEHI, Melbourne, Australia
Answer: Using edgeR and a spike-in to calculate absolute abundance
3 years ago
Seattle, WA, United States
Answer: Problem loading R packages on MacBook Pro
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