Biostar BatchtoolsParam

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BatchtoolsParam BiocParallel

12 months ago • updated 10 months ago jianhai.zhang • 0

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BatchtoolsParam MulticoreParam BiocParallel

updated 12 months ago by Martin Morgan 25k • written 12 months ago by jianhai.zhang • 0

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biocparallel BatchtoolsParam

updated 4.4 years ago by Mike Smith ★ 6.0k • written 4.4 years ago by Chao-Jen Wong ▴ 30

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Comment: Time-course, comparison of two groups by Gordon Smyth 47k

My suggestion was not to use splines, in which case it's all pretty easy. If you insist on using splines, then you need to learn how to us…

Answer: Plot profiles for each group - spline analysis in edgeR by Gordon Smyth 47k

As I mentioned to you in response to your previous question, in order to plot fitted trends, you need to first extract fitted values or est…

Answer: Compare and filter three BAM files by swbarnes2 ★ 1.2k

If you think you have a mix of three different organisms in the ix, the better way to do this is to make one reference with all three genom…

Comment: enrichKEGG results for non-model organism by Aciole.D • 0

If anyone still wondering about this: You can filter your 'kegg' object based on a list of target pathways. Look at these fields: `kegg@…

Comment: KEGG enrichment in R and gene IDs by Laia ▴ 10

I could finally solve this and I could get KEGG results :) Thank you so much for your help and quick replies. Best, Laia

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Answer: How edgeR estimate the common dispersion?

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