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BitSeq
•
reset
5
votes
18
replies
3.2k
views
Incongruencies between DEXSeq and BitSeq/Cuffdiff
dexseq
bitseq
cuffdiff
Differential exon usage
isoforms
9.0 years ago • updated 8.9 years ago
elle
▴ 10
1
vote
5
replies
1.7k
views
using BitSeq data as input for spliceR
bitseq
spliceR
9.1 years ago • updated 9.0 years ago
elle
▴ 10
0
votes
2
replies
1.3k
views
BitSeq transcript IDs
Alignment
PROcess
BitSeq
Alignment
PROcess
BitSeq
updated 11.2 years ago by
Maayan Kreitzman
▴ 30 • written 11.2 years ago by
Peter Glaus
▴ 70
0
votes
1
reply
1.1k
views
BitSeq getExpression crash
Alignment
PROcess
BitSeq
Alignment
PROcess
BitSeq
updated 11.2 years ago by
Peter Glaus
▴ 70 • written 11.2 years ago by
Maayan Kreitzman
▴ 30
2
votes
3
replies
1.3k
views
Technical and biological replates in BitSeq
BitSeq
bitseq
rnaseq
updated 8.7 years ago by
Ryan C. Thompson
★ 7.9k • written 8.7 years ago by
Sam McInturf
▴ 300
0
votes
6
replies
1.7k
views
BitSeq input data error
BitSeq
BitSeq
updated 11.6 years ago by
Peter Glaus
▴ 70 • written 11.6 years ago by
Fatemehsadat Seyednasrollah
▴ 260
0
votes
1
reply
984
views
BitSeq: Required input for 3' bias correction on transcripts.
RNASeq
BitSeq
RNASeq
BitSeq
updated 11.3 years ago by
Peter Glaus
▴ 70 • written 11.3 years ago by
Dave Gerrard
▴ 40
0
votes
1
reply
955
views
BitSeq getExpression (type=counts) - (why all 1 or higher)
BitSeq
updated 9.1 years ago by
Antti Honkela
▴ 50 • written 9.1 years ago by
dietmar.pils
• 0
1
vote
1
reply
1.1k
views
BitSeq with paired samples
bitseq
paired samples
updated 8.8 years ago by
panagiotis.papastamoulis
▴ 30 • written 8.8 years ago by
MariaJoseG
• 0
0
votes
0
replies
865
views
SamBit input data error
BitSeq
BitSeq
11.6 years ago
Fatemehsadat Seyednasrollah
▴ 260
0
votes
0
replies
1.0k
views
BitSeq: Required input for 3' bias correction on transcripts.
RNASeq
safe
BitSeq
RNASeq
safe
BitSeq
11.3 years ago
Dave Gerrard
▴ 40
0
votes
0
replies
1.5k
views
Differential expression workflow for alternative splicing
dexseq
bitseq
spliceR
9.1 years ago
elle
▴ 10
0
votes
0
replies
1.1k
views
BitSeq: Required input for 3' bias correction on transcripts.
Transcription
RNASeq
safe
BitSeq
Transcription
RNASeq
safe
BitSeq
11.3 years ago
Peter Glaus
▴ 70
13 results • Page
1 of 1
Recent ...
Replies
Comment: GSVA function
by
Robert Castelo
★ 3.3k
No, negative values may occur after log transformation when the `log(x)` is taken from a positive number `x with 0 < x < 1`, and therefore …
Comment: conumee with Infinium MethylationEPIC v2.0
by
sgomez
• 0
Hi Max, Could you try this? https://support.bioconductor.org/p/9136138/#9136840
Comment: Error in render R qmd document (could not find function "process")
by
ATpoint
★ 4.2k
This is not related to Bioconductor, and even if it was, please understand that without code one cannot debug these questions. The most obv…
Comment: GSVA function
by
michelafrancesconi8
• 0
When I log trasform my matrix after the DESeq2 normalization, I have some negative value, should I add a 1 to all my matrix? Thank you Mi…
Comment: Normalisation using clinical traits in RNA seq using DESeq2
by
sukeshinik5
• 0
Thank you, so much for the response. When we estimate factors of unwanted variable, which is the better options for factorisation of the va…
Votes
A: Comparison between two different group's pathway analysis results
DiffBind Batch Effect
A: DiffBind Batch Effect
A: DiffBind Batch Effect
C: DiffBind Batch Effect
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