Bioconductor Isoforms

Showing : isoforms • reset

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656

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isoforms DESeq2

20 months ago arfranco ▴ 130

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1.6k

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RATs RNA-Seq Isoforms DTU expression

updated 4.4 years ago by fruce_ki ▴ 20 • written 4.4 years ago by UserAnonyme • 0

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1.2k

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isoforms diffrential expression noncoding rna TSIS isoformswitchanalyzeR

5.6 years ago rbenel ▴ 30

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862

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dexseq differential isoform usage isoforms summarizeoverlaps granges

5.7 years ago A ▴ 40

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1.4k

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cummerbund heatmap isoforms transcript_id

6.7 years ago domenico.somma • 0

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2.8k

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dexseq bitseq cuffdiff Differential exon usage isoforms

8.5 years ago • updated 8.4 years ago elle ▴ 10

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2.3k

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edgeR ruvseq rnaseq isoforms

8.5 years ago sergio.espeso-gil • 0

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1.3k

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DEXSeq transcripts isoforms

updated 8.5 years ago by Alejandro Reyes ★ 1.9k • written 8.6 years ago by peter_venhuizen • 0

8 results • Page 1 of 1

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Comment: NCBI protein conversion to CDNA and NCBI gene (in R) by Gordon Smyth 48k

Continuation of https://support.bioconductor.org/p/9155428/

Comment: Why is DMRcate not available for Bioconductor version 3.18? by Tim Peters ▴ 150

Thanks Daniel, Gordon and Lori for flagging this. DSS is only needed for the vignette so I'll remove that section, plus the dependency, som…

Comment: NCBI protein to NCBI cDNA (Ensembl conversions would be great as well) in R by R_Page • 0

Thank you, this works well. As for CDNA, I figured out what I need to find, and have made a new post regarding it.

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0

Hello Michael, I am continuing here and need your expert answer on this again I have performed small rna loci and DNA methylation mappin…

Comment: GOslim missing GO term by amanda • 0

Thank you for the advice and many thanks! It is WGCNA analysis. I will try your method today and see if there are some consistencies.

Votes

Answer: Differential gene expression analysis

Comment: Why is DMRcate not available for Bioconductor version 3.18?

Why is DMRcate not available for Bioconductor version 3.18?

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