Bioconductor ChAMP

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Bioconductor ChAMP

updated 7 hours ago by ATpoint ★ 4.2k • written 12 hours ago by Macsue • 0

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ChAMP

updated 11 days ago by shepherl 3.9k • written 11 days ago by Galia • 0

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Cha ChAMP

updated 4 days ago by James W. MacDonald 66k • written 14 days ago by e1271094 • 0

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Comment: GSVA function by Robert Castelo ★ 3.3k

No, negative values may occur after log transformation when the `log(x)` is taken from a positive number `x with 0 < x < 1`, and therefore …

Comment: conumee with Infinium MethylationEPIC v2.0 by sgomez • 0

Hi Max, Could you try this? https://support.bioconductor.org/p/9136138/#9136840

Comment: Error in render R qmd document (could not find function "process") by ATpoint ★ 4.2k

This is not related to Bioconductor, and even if it was, please understand that without code one cannot debug these questions. The most obv…

Comment: GSVA function by michelafrancesconi8 • 0

When I log trasform my matrix after the DESeq2 normalization, I have some negative value, should I add a 1 to all my matrix? Thank you Mi…

Comment: Normalisation using clinical traits in RNA seq using DESeq2 by sukeshinik5 • 0

Thank you, so much for the response. When we estimate factors of unwanted variable, which is the better options for factorisation of the va…

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DiffBind Batch Effect

A: DiffBind Batch Effect

C: DiffBind Batch Effect

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