Showing : DESeq2 • reset
9
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15
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7.6k
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DESeq2 on NanoString Data
deseq2 nanostring
updated 6 months ago by 43k • written 7.7 years ago by ▴ 170
1
vote
6
replies
2.2k
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how to analysis htseq-count
deseq2
written 8.1 years ago by ▴ 30
1
vote
3
replies
6.8k
views
Log2 fold change value in DESeq2
deseq2 rnaseq
written 8.4 years ago by • 0
0
votes
2
replies
3.8k
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DESeq2 Design controlling for gender
deseq2 multiple factor design
written 8.5 years ago by • 0
0
votes
3
replies
2.2k
views
Controlling for batch and estrus cycle using DESeq2 in RNA-seq analysis
deseq2 random effects batch effects RNA-seq rna-seq
written 8.6 years ago by • 0
5
votes
30
replies
6.9k
views
DESeq2 model - How to test case/control time course model when taking account within sample variability?
deseq2 multiple time points time course casecontrol model design
updated 11 months ago by • 0 • written 8.7 years ago by ▴ 10
0
votes
1
reply
1.2k
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Inclusion of non-coding portions of transcripts (UTR-regions and introns) within the DEX-seq dataset
dexseq deseq2 differential exon usage
updated 7 months ago by • 0 • written 9.4 years ago by ▴ 10
31
votes
25
replies
65k
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deseq2 filter the low counts
deseq2 lowcount
updated 4 months ago by 43k • written 11.0 years ago by ▴ 40
38
votes
23
replies
19k
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DESeq2 testing ratio of ratios (RIP-Seq, CLIP-Seq, ribosomal profiling)
deseq2
11.5 years ago • updated 11 months ago Michael Love 43k
12
votes
7
replies
23k
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DESEq2 comparison with mulitple cell types under 2 conditions
deseq2 multiple factor design
updated 9 months ago by ▴ 740 • written 10.8 years ago by ▴ 50
110 results • Page 3 of 3
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Comment: Can sample-level weights be used when analysing GSVA scores in limma? by A.Barden ▴ 20
Thanks both for this useful information.
Comment: Reproducibility of code in various Bioconductor versions by Gordon Smyth 53k
SNPlocs.Hsapiens.dbSNP155.GRCh38 is available for download from the same location as always. It has not changed since Bioc 3.20: Presumabl…
Comment: Changing multiple display parameters of a specific exon in GeneRegionTrack by a2a2hd42aa • 0
Similarly, for structural complexity in the [He777 Game][1] APK, having precise control over every detail is what makes a high-performance …
Answer: Issue loading and downloading Bioconductor 3.22 packages after update by strawberry3 • 0
Hi, thank you all for the advice. Using James's advice, I managed to install SNPlocs.Hsapiens.dbSNP155.GRCh38, but it took almost half an …
Answer: Issue loading and downloading Bioconductor 3.22 packages after update by James W. MacDonald 68k
As Robert and ATpoint have mentioned, you need to allow more time to download a large file like this. ``` > options(timeout = 5e5) > l…
Votes
Do I map probes to gene symbols BEFORE or AFTER differentially expressed gene analysis?
Answer: Can sample-level weights be used when analysing GSVA scores in limma?
Answer: Can sample-level weights be used when analysing GSVA scores in limma?
Comment: Can sample-level weights be used when analysing GSVA scores in limma?
Answer: Issue loading and downloading Bioconductor 3.22 packages after update
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