Bioconductor Dese

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196

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DESeq2 Dese

updated 9 weeks ago by Michael Love 42k • written 9 weeks ago by Léa • 0

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276

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DESeq2 dese

updated 3 months ago by ATpoint ★ 4.2k • written 3 months ago by Xu • 0

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304

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dese DESeq2

4 months ago • updated 3 months ago pl23 • 0

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451

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dese DESeq2

5 months ago Hugo • 0

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854

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DESe DESeq2

10 months ago Adèle • 0

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1.0k

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Dese DESeq2

12 months ago • updated 11 months ago Asger Mølgaard • 0

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1.8k

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DESeq2 lfcshrink DESe

updated 12 months ago by Michael Love 42k • written 12 months ago by Alina • 0

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1.2k

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DESeq2 Dese DifferentialRegulation differe

updated 10 weeks ago by feather-W • 0 • written 13 months ago by Bernardo ▴ 10

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938

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dese DESeq2

updated 2.0 years ago by James W. MacDonald 66k • written 2.0 years ago by lmrogers34 ▴ 10

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3.4k

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DESE DESeq2

updated 2.0 years ago by Basti ▴ 780 • written 2.0 years ago by Maryam.sed1400 • 0

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1.4k

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DESeq2 dese

2.3 years ago aedavids ▴ 20

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873

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DESeq2 dese

2.6 years ago wilfried.guiblet • 0

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641

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DESe DESeq2

updated 2.6 years ago by Michael Love 42k • written 2.6 years ago by Dinesh • 0

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1.0k

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DESeq2 DESe

updated 3.2 years ago by Michael Love 42k • written 3.2 years ago by glennli • 0

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786

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DESeq2

updated 3.5 years ago by Michael Love 42k • written 3.5 years ago by hpapoli • 0

15 results • Page 1 of 1

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Comment: Error in gseDO function by Javier • 0

Thank you for your answer! The thing is I'm working with 12 genes (I did also some targeted cholesterol efflux-related genes, but for sha…

Comment: Why is longestConsecutive() depreceated in version 2.72 (BioC version 3.19)? by Ali Osman • 0

Thanks for your response and suggestions @atpoint ! I think implementation of the function is not a problem (I already have some options an…

Comment: DEXSeq errors "Error in scan( line ... did not have 3 elements" and "Error in FU by Marek Gierlinski ▴ 30

Two years on and the issue is still there. Thank you Arthur for the solution!

Comment: Cannot install oligo on Fedora by mbassal • 0

so whats the solution for this error?

Comment: Why is longestConsecutive() depreceated in version 2.72 (BioC version 3.19)? by ATpoint ★ 4.2k

I don't have an answer to the "why" but maybe a simple reimplemention will do: ```r seqs <- c("ATCATCGTATCAAAGTC", "AAAACGTATCAAAGTC", "TG…

Votes

A: DESeq2: add annotations (from data frame) to DESeqDataSet

Answer: Error in gseDO function

Comment: what the test method for enrichGO in clusterProfiler?

A: Comparison between two different group's pathway analysis results

DiffBind Batch Effect

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