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Diffbind
•
reset
2
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149
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[DiffBind] Obtaining normalization factors
DiffBind
13 days ago • updated 9 days ago
Henry
▴ 10
2
votes
2
replies
358
views
[Diffbind] Blacklist error: Error: Invalid Normalization and Unable to apply Blacklist/Greylist
DiffBind
Normalization
14 days ago • updated 13 days ago
Henry
▴ 10
0
votes
0
replies
97
views
PCA plot for normalized counts using Diffbind
DiffBind
PCAplot
27 days ago
Ankit
▴ 20
0
votes
0
replies
99
views
How to extract the coordinate of dba.plotPCA?
DiffBind
PCA
27 days ago
feather-W
• 0
0
votes
0
replies
24
views
ATACseq merge peaks
DiffBind
1 day ago
Shloka
• 0
0
votes
4
replies
199
views
Differential peaks that were not identified in diffbind were identified in diseq2
DiffBind
DESeq2
ATACSeq
8 days ago • updated 6 days ago
lonn
• 0
0
votes
0
replies
76
views
Diffbind Error in socketConnection
DiffBind
Errorinsocketconnection
SpikeIn
10 days ago
Virangika
• 0
0
votes
0
replies
84
views
DIFFBIND : beginner questions, sex, multiple phenotypes, etc...
DiffBind
ATACSeq
28 days ago
Pierre Lindenbaum
▴ 10
8 results • Page
1 of 1
Recent ...
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Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
winwater0928
• 0
Thank you for your comment! I'll review my code from top to bottom.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Oh LOL. My markdown got edited by the markdown editor! What is between the p and 50 in the first case is the HTML for greater than or equal…
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Ah, good point. You could instead try ``` > library(ggtext) > keyvals.shape = c(rep(3,10), rep(2,8)) > names(keyvals.shape) = ifelse(keyva…
Votes
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
Answer: Cross-species analysis - how to compute the mid parent value?
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
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