Bioconductor FeatureCount

Showing : FeatureCount • reset

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830

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featureCount Rsubread HPC

2.2 years ago kthapa • 0

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2.0k

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DESeq2 FeatureCount

updated 3.2 years ago by ATpoint ★ 5.0k • written 3.2 years ago by Jiayi • 0

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1.1k

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ExomeSeq featureCount

4.0 years ago adR ▴ 40

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2.4k

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featurecount rsubread GenomicAlignments

5.7 years ago Konstantinos Yeles ▴ 90

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3.8k

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dexseq rsubread featureCount software error

updated 6.0 years ago by Yang Liao ▴ 450 • written 6.0 years ago by seung.ho.steven.choi • 0

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2.7k

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featureCount rna-seq gene_id re_gene_id stringtie

updated 6.8 years ago by Wei Shi ★ 3.6k • written 6.8 years ago by IRAIA.MAIALEN • 0

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Answer: How can I correctly use phyloseq with Docker? by Kevin Blighe ★ 4.0k

The Bioconductor version must be compatible with the R version. Bioconductor version 3.18 is compatible with R version 4.3. The Dockerfile …

Answer: Boolean Gate Combination for Any 2 Positive Events in flowWorkspace by Kevin Blighe ★ 4.0k

Your proposed code is correct and will achieve the desired outcome. The boolean filter expression `IFNg & TNFa | IFNg & IL2 | TNFa & IL2` i…

Answer: Install old version of DESeq2 by Kevin Blighe ★ 4.0k

The Dockerfile that you have provided is appropriate for installing DESeq2 and apeglm from Bioconductor release 3.10, which corresponds to …

Answer: Guidance Requested on GCN Network Analysis and Module Enrichment in R by Kevin Blighe ★ 4.0k

The discrepancy between `final_exp1` and `final_exp2` could arise from several factors, despite matching dimensions. The `identical()` func…

Answer: ORFik: spliced 5utr regions by Kevin Blighe ★ 4.0k

Hello Luna. The findUORFs function in ORFik identifies upstream open reading frames by extracting and concatenating the sequences of exo…

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Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Post translational modifications and phosphoproteomics in limpa?

Answer: Identifying differentially expressed genes in individual samples from a large co

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