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FlowCore
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1
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264
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FCS3.2 reading
flowWorkspace
flowCore
CytoML
updated 6 weeks ago by
SamGG
▴ 350 • written 11 weeks ago by
jarod
▴ 30
0
votes
0
replies
116
views
Macsquant FCS in read.FCS & opencyto
FlowCytometry
flowWorkspace
flowCore
6 weeks ago
taylor.witte
• 0
0
votes
0
replies
229
views
News:
Online course - Flow cytometry data analysis with R/Bioconductor
flowDensity
flowCore
3 months ago
info
▴ 10
0
votes
6
replies
923
views
flowCore >2.0 read.FCS results in $SPILLOVER error when reading certain FCS files (could it be a warning?)
read.FCS
flowCore
updated 4 months ago by
SamGG
▴ 350 • written 4 months ago by
das.traveller
• 0
1
vote
1
reply
384
views
How to read fcs3.2 files
flowCore
updated 5 months ago by
James W. MacDonald
65k • written 5 months ago by
Gabriel
▴ 10
0
votes
2
replies
435
views
Cannot open Sysmex Partec CUbe 6 .fcs with read.FCS
Partec
read.FCS
flowCore
6 months ago
mrescan
• 0
0
votes
8
replies
1.7k
views
flowset/ncdfFlowset replace keywords doesn't work right
ncdfFlow
flowCore
updated 7 months ago by
osayou
• 0 • written 3.6 years ago by
anders.tondell
▴ 30
0
votes
0
replies
387
views
Best method to manually add a cluster ID to a fcs or csv file
flowCore
cytoMEM
9 months ago
aguirre
▴ 20
8 results • Page
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Comment: Help with running egsea()
by
Chris
• 0
I tried egsea.ma and got this error: gsa = egsea.ma(fit2, vector_group, probe_annotation, contrasts = contrast_matrix, gs.annots = gs.…
Comment: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call
by
angelathuynh5
• 0
Thank you for your response. To clarify, the process of making a heatmap performs rowscaling so it takes the value - (mean/std). And to res…
Comment: Limma without eBayes, is it indistunguishable from Ordinary Least Square?
by
Gordon Smyth
50k
The formula given in the original question is correct and yours is not. Your formula isn't even constrained to be between 0 and 1. Here is …
Comment: Method to find pathways different between 2 groups
by
Gordon Smyth
50k
sigPathway is another method that does not account for inter-gene correlation and which gives inflated significance, as we showed in our 20…
Answer: error in limma , contrast.matrix Number of rows of contrast matrix must match nu
by
James W. MacDonald
65k
I doubt you have that many contrasts. I think that is probably the number of rows. What does `dim(fit)` return (and `head(fit$coef)`)?
Votes
Answer: confused with tximport counts abundance using salmon input
Answer: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call
Answer: error in limma , contrast.matrix Number of rows of contrast matrix must match nu
Answer: Extremely small p-values using Limma for proteomic data
Answer: How to save the DEXSeq results
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