Showing : flowWorkspace • reset
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Job: Post-Doctoral Bioinformatics Research Scientist / Bioinformatician II
flowWorkspace CytoGLMM FlowSOM
22 months ago hbolouri • 0
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1
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562
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Getting a dataset that only contains the flow data within the gated area
flowWorkspace
updated 2.0 years ago by ★ 1.3k • written 2.0 years ago by • 0
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1.2k
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how to get MFI stats from data
flowCore flowStats flowUtils flowWorkspace
updated 2.0 years ago by ★ 1.3k • written 2.4 years ago by • 0
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1.1k
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ggcyto wrong axis scale?
ggcyto flowWorkspace flow cytometry flowjo
updated 3.3 years ago by 3.8k • written 3.3 years ago by ▴ 10
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5
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802
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Calculate F measure to compare different gating approaches for a specific cell population
flowWorkspace flowCore openCyto flowFrame F-measure
updated 3.5 years ago by ▴ 310 • written 3.5 years ago by • 0
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1
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1.9k
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uploading xml file in flowworkspace
flowworkspace xml R flowjo
updated 3.8 years ago by • 0 • written 6.5 years ago by ▴ 10
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3
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818
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Problem parsing data with parseWorkspace
flowWorkspace
4.0 years ago jokup101 • 0
3
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2
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817
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flowWorkspace cannot load external data
flowWorkspace external data flowCore
4.1 years ago Brent.OCarrigan • 0
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3
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935
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Cannot inverse transform GatingSet
flowworkspace flow cytometry flow workspace
updated 4.4 years ago by ▴ 310 • written 4.4 years ago by • 0
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709
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How to get popStats from wsp
flowworkspace
updated 4.8 years ago by ★ 1.3k • written 4.8 years ago by ▴ 10
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3
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1.1k
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FlowJo workspace cannot be parsed with flowworkspace
flowworkspace parseWorkspace parseWorkspace
updated 5.0 years ago by ★ 1.3k • written 5.0 years ago by ▴ 10
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4
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1.5k
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Trying to plot MFI using Flowworkspace but parameters are transformed by 'flowjo_biexp'. How do I get untransformed values?
flowworkspace
updated 5.3 years ago by ★ 1.3k • written 5.3 years ago by • 0
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3
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1.3k
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Unable to install flowWorkspace from github
flowWorkspace cytoutils
updated 5.5 years ago by 25k • written 5.5 years ago by ▴ 30
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5
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1.6k
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How to find Geometric Mean from gated Quantibeads
flowworkspace opencyto
updated 6.1 years ago by ★ 1.3k • written 6.1 years ago by ▴ 10
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598
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How to adjust plotGate axis?
flowworkspace
6.2 years ago justinyi10 ▴ 10
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1.2k
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getIndices identifies non existing cells in a gate
flowworkspace getIndices
updated 6.6 years ago by ★ 1.3k • written 6.6 years ago by • 0
2
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5
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1.8k
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Workflow highthroughputassays can't install properly
workflows flowcore flowstats flowworkspace
6.6 years ago kristoffer.haurum • 0
3
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1.5k
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An appeal to flow cytometry tools users
flow flowcore flowworkspace cytometry gating
6.7 years ago Greg Finak ▴ 240
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1
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892
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exporting bi-exponetially transformed data as CVS
flowWorkspace flowcore
updated 6.7 years ago by ★ 1.3k • written 6.7 years ago by ▴ 10
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4
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1.1k
views
Parsing flowWorkspace data
opencyto R flowworkspace bioconductor
updated 6.8 years ago by ★ 1.3k • written 6.8 years ago by • 0
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1
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1.9k
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reading an ".xml" file as FlowJo Workspace file
opencyto gating opencyto flowcore flowworkspace
updated 7.4 years ago by ★ 1.3k • written 7.4 years ago by • 0
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2
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2.2k
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OpenCyto -- proper gating of CD45
opencyto gating flowworkspace
updated 7.4 years ago by ★ 1.3k • written 7.4 years ago by ▴ 30
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1.0k
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on extend_val parameter in parseWorkspace
flowworkspace
updated 7.5 years ago by ★ 1.3k • written 7.5 years ago by ▴ 10
2
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1
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1.5k
views
Trouble parsing a workspace in flowWorkspace
flowworkspace opencyto
updated 7.5 years ago by ▴ 10 • written 7.5 years ago by ▴ 10
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1
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1.6k
views
FlowWorkspace and norm2Filter
flowcytometry opencyto flowworkspace flowcore
7.5 years ago Jiang, Mike ★ 1.3k
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9
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2.7k
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Problem with ggcyto/flowWorkspace from GitHub
software error flowworkspace opencyto
7.7 years ago anders.tondell ▴ 30
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6
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1.5k
views
flowWorkspace: Crash when using getPopStats with format="wide"
flowworkspace
7.7 years ago Viktor Thiel • 0
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1.2k
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Exporting to FlowJo
flowworkspace
7.8 years ago hunjoong.lee • 0
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2
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994
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flowWorkspace doesn't allow channels that are named as subset (edit: substring) of other (PE-A and PE-Alexa Fluor 700-A eg.)
flowWorkspace
updated 7.8 years ago by ★ 1.3k • written 7.8 years ago by ▴ 10
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1
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1.3k
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Understanding Flow cytometry data
flow cytometry flowcore flowclean rflowcyt flowworkspace
updated 7.8 years ago by ★ 1.3k • written 7.8 years ago by • 0
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2
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1.2k
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Problem updating flowWorkspace -- error: unrecognized command line option "-ftemplate-depth=900"
flowWorkspace
updated 7.9 years ago by ★ 1.3k • written 7.9 years ago by • 0
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3
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1.1k
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Displaying Negative data from flow cytometers
flowcore flowworkspace flowviz
updated 7.9 years ago by ★ 1.3k • written 7.9 years ago by • 0
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1.3k
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flowWorkspace and ggcyto
flowworkspace flow cytometry visualization
8.1 years ago Jiang, Mike ★ 1.3k
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0
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1.2k
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On boolean combinations (flowWorkspace)
flowworkspace flow cytometry
8.3 years ago Jiang, Mike ★ 1.3k
2
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5
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1.3k
views
Memory problem using openWorkspace()
flowworkspace
8.9 years ago Silke Zachariae ▴ 30
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1.2k
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flowWorkspace transformation on FCS 3 data (Nikolas)
PROcess flowWorkspace PROcess flowWorkspace
updated 11.4 years ago by ▴ 30 • written 11.5 years ago by ▴ 240
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flowWorkspace transformation on FCS 3 data
PROcess flowWorkspace PROcess flowWorkspace
11.5 years ago Nikolas ▴ 30
37 results • Page 1 of 1
Recent ...
Replies
Comment: DMRcate design by Jitendra ▴ 10
Thanks James, do I also need to mention 'contrasts=FALSE' in cpg.annotate.And also what to mentions in analysis.type="differential",/ "ANO…
Comment: Speeding up of DelayedArray::write_block() by Koki ▴ 10
I don't know the details but do you mean using `HDF5RealizationSink` or `TENxRealizationSink` will make it possible to writing sparse multi…
Comment: DelayedArray::read_sparse_block by Koki ▴ 10
Ok, I understood. How about "writing" to HDF5? Are you going to implement `write_block_as_sparse` in `SparseArray` package?
Comment: DelayedArray::read_sparse_block by Hervé Pagès 16k
> So do you means the specification change from DelayedArray's read_sparse_block to SparseArray's read_block_as_sparse will accelerate the …
Comment: DelayedArray::read_sparse_block by Koki ▴ 10
Thanks for your reply. So do you means the specification change from `DelayedArray`'s `read_sparse_block` to `SparseArray`'s `read_block_a…
Votes
Answer: DMRcate design
Answer: DMRcate design
Comment: DMRcate design
Answer: What MetaPhlAn3 database was used in cMD 3?
Comment: Speeding up of DelayedArray::write_block()
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