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GUIDEseq
•
reset
2
votes
4
replies
1.5k
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GUIDESeq analysis - handling biological and technical replicates
guideseq
updated 6.7 years ago by
Julie Zhu
★ 4.3k • written 6.7 years ago by
aamir.mir
• 0
2
votes
1
reply
1.2k
views
createBarcodeFasta in GUIDEseq
GUIDEseq
updated 6.7 years ago by
Julie Zhu
★ 4.3k • written 6.7 years ago by
aamir.mir
• 0
0
votes
6
replies
1.0k
views
Option to override removal of duplicate reads - GUIDEseq
GUIDEseq
updated 21 months ago by
Julie Zhu
★ 4.3k • written 21 months ago by
sharvari gujja
▴ 40
0
votes
0
replies
980
views
Analyzing CIRCLE-seq data using GUIDEseq package
GUIDEseq
CIRCLE-seq
6.5 years ago
Julie Zhu
★ 4.3k
0
votes
4
replies
971
views
GUIDEseq Error using offTargetAnalysisOfPeakRegions
GUIDEseq
updated 4.4 years ago by
Julie Zhu
★ 4.3k • written 4.4 years ago by
tomas.rodriguez
▴ 10
0
votes
3
replies
955
views
GUIDEseq plus/minus strand inputs
GUIDEseq
updated 4.7 years ago by
Julie Zhu
★ 4.3k • written 4.7 years ago by
tomas.rodriguez
▴ 10
0
votes
2
replies
880
views
GUIDEseq Error in GAlignmentPairs
GAlignmentPairs
GUIDEseq
updated 4.7 years ago by
Julie Zhu
★ 4.3k • written 4.7 years ago by
tomas.rodriguez
▴ 10
0
votes
2
replies
859
views
getUniqueCleavageEvents() not working in GUIDEseq package
GUIDEseq
updated 3.3 years ago by
Julie Zhu
★ 4.3k • written 3.3 years ago by
Tiffany
• 0
1
vote
3
replies
827
views
GUIDEseq BED input error
GUIDEseq
4.4 years ago
tomas.rodriguez
▴ 10
0
votes
1
reply
679
views
GUIDEseq outputDir error
GUIDEseq
updated 4.7 years ago by
Julie Zhu
★ 4.3k • written 4.7 years ago by
tomas.rodriguez
▴ 10
3
votes
1
reply
652
views
Major on-target peak not appearing in GUIDEseq results
GUIDEseq
updated 3.2 years ago by
Julie Zhu
★ 4.3k • written 3.2 years ago by
David Kuo
• 0
0
votes
1
reply
640
views
GUIDEseq bam input
GUIDEseq
bam
updated 4.7 years ago by
Julie Zhu
★ 4.3k • written 4.7 years ago by
tomas.rodriguez
▴ 10
0
votes
1
reply
545
views
GUIDEseq - Error combining individual steps into the pipeline
GUIDEseq
updated 24 months ago by
Julie Zhu
★ 4.3k • written 24 months ago by
sharvari gujja
▴ 40
0
votes
0
replies
473
views
Question about input to binReads.sh in GUIDEseq
GUIDEseq
2.0 years ago
sharvari gujja
▴ 40
0
votes
0
replies
403
views
GUIDEseq: read count for each offtarget
GUIDEseq
24 months ago
sharvari gujja
▴ 40
0
votes
0
replies
347
views
GUIDEseq - filtering offtarget sites present in background controls
GUIDEseq
24 months ago
sharvari gujja
▴ 40
16 results • Page
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Comment: EGSEA usage with microarray data (with vooma)?
by
Chris
• 0
Hi Pekka, I also try EGSEA with microarray data. However, I got this error. Would you please have a suggestion? gsa = egsea.ma(numeric…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
> Any suggestions for methylation data segmentation? I think the same segmentation can be used.
Comment: deseq2 results
by
swbarnes2
★ 1.3k
Cross-posted https://www.biostars.org/p/9594331/#9594458
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
Mike Smith
★ 6.5k
The other answers here are all good and demonstrate the issue with floating point comparisons nicely. I'd like to add that your particular…
Comment: More regions in union when increasing DBA$config$mergeOverlap
by
Ian D.
▴ 70
Nudging my question. I could do with confirmation before proceeding with my current projects. Thank you.
Votes
A: Volcanoplot with limma - RAW P-values or Adj.P-Values
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: minfi latest update for EPIC V2 chip
A: Error in DESeqDataSet : some values in assay are not integers
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Michael Love
42k
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Haibo Liu
• 0
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HS
▴ 10
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DevelopingHippo
• 0
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Robert Castelo
★ 3.3k
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