updated 2.7 years ago by
markus.riester
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written 4.2 years ago by
roshniroy16
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Comment: DuplicateCorrelation() block by duplicate sample or by cell line ?
by
Gimena
•
0
Hi James,
Yes, these are complete cases. every line has all the treatment groups and technical replicates.
Comment: DuplicateCorrelation() block by duplicate sample or by cell line ?
by
Gimena
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0
I am sorry for the confusion. It goes like this:
3 drug exposures (vehicle, low and high dose) x 2 replicates per condition: technical re…
Comment: How does Deseq2 deal with the row with zero when calculating size factors
by
jiakang
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0
Thanks for your quick reply. I understand and have noticed the code you mentioned above.
> the size factors results of sfType = "poscount…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
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0
Yes. I considered genome wide p value as cutoff.
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
41k
It sounds like you have more overlaps than by chance, is that what you would like to see?
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