Bioconductor Minion

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ioniser bioinformatics minion

updated 8.4 years ago by Lescai, Francesco ▴ 380 • written 8.9 years ago by nathaniellegall • 0

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IONiseR Minion

updated 9.1 years ago by Mike Smith ★ 6.6k • written 9.1 years ago by christophe.klopp • 0

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IONizeR MinION fast5

updated 9.6 years ago by Martin Morgan 25k • written 9.6 years ago by playerraa • 0

3 results • Page 1 of 1

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Comment: Chip Seq Analysis of RNA Polymerase 2 by Tikaaaq2c • 0

Without proper scaling or an enrichment check , Pol 2 peaks can appear flat against the background. If the data remains noisy, you might w…

Comment: Changing multiple display parameters of a specific exon in GeneRegionTrack by Tikaaaq2c • 0

Organizing complex transcripts requires the same discipline as managing a digital library on a learning platform. Many researchers use a [S…

Comment: soGGi error by shepherl 4.3k

We have tried to contact the soGGi maintainer to have them update the package to the newer version of gglot2 but they have so far been unre…

Comment: using limma trend workflow in CAMERA by Gordon Smyth 53k

No, `trend.var=TRUE` and `trend=TRUE` are not needed in any voom pipeline, because the trend is already incorporated into the voom weights.

Comment: Questions about bacon QC and correction on EWAS results by Tikaaa2sahaaaq2c • 0

In the world of mobile games, the 88ef game download has gained traction for its performance driven design [free download][1], similar to …

Votes

Answer: DiffBind differential analysis

Answer: Limma-voom sample weights and impact on DEG numbers

C: Why limma, edgeR, and DESeq did not implement fold change moderation first?

Comment: using limma trend workflow in CAMERA

C: z-score with DESeq2?

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