Bioconductor PCR

Showing : PCR • reset

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644

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virus pcr amplican mutations

21 months ago Sara • 0

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867

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PCR DECIPHER PNA

5.1 years ago marissaruthlee • 0

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3.3k

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limma pcr

updated 6.4 years ago by Gordon Smyth 51k • written 11.0 years ago by Sandhya Pemmasani Kiran ▴ 40

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1.5k

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nondetects R PCR

updated 7.2 years ago by Matthew McCall ▴ 830 • written 7.2 years ago by garciaii_antuerpia • 0

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1.2k

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fluidigm normalization limma pcr

updated 7.8 years ago by Gordon Smyth 51k • written 7.8 years ago by raf4 ▴ 30

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Comment: Differential Expression Analysis with unbalanced batches without replication bet by Thili • 0

Thank you for your reply. I currently have batch-corrected data processed with scvi-tools (specifically, totalvi) and have followed the sam…

Comment: Problem at champ.load by andrew.gibbons • 0

I'd love to know if anyone has a workaround too. I've tried rolling back ChAMP and R to the previous versions that others have said work wi…

Comment: GOstats kegg analysis in wheat - help - none of the objects in the first column by GV Yoshikawa • 0

Thank you for the reply. I tried swapping columns before asking, it made no difference. head(keggframeData) path_id kegg…

Answer: Differential Expression Analysis with unbalanced batches without replication bet by Gordon Smyth 51k

> Is there an alternative model or approach in tools like edgeR, limma-voom, or DESeq2 or any other that can handle confounded batch effect…

Comment: BiomaRt Possible Ensembl SSL connectivity problems detected. by Adam • 0

I just found this workaround: httr::set_config(config(ssl_verifypeer = FALSE, ssl_verifyhost = FALSE)) at [this Stack Overflow link][…

Votes

A: Up/Down Regulated GeneList from edgeR and R

A: Down/Up-regulated genes asymmetry in edgeR differential expression analysis

Answer: Combining RNAseq and microarray data using edgeR/limma-voom

Answer: How do I merge a list of GRanges?

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